Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC106901.1-201ENST00000425086 698 ntBASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 Z80107.2-201ENST00000445127 392 ntBASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 RN7SL610P-201ENST00000463845 291 ntBASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 AC104763.1-201ENST00000475274 360 ntBASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 AC083982.1-201ENST00000485679 344 ntBASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 RPS4XP18-201ENST00000495480 763 ntBASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 AC051619.2-201ENST00000559063 397 ntBASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 AP003400.2-201ENST00000624036 666 ntBASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 U3.53-201ENST00000628922 216 ntBASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC65Q8IXS2 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 ZNF137P-201ENST00000456718 1920 ntBASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 AC108467.2-201ENST00000617640 1597 ntBASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 AL391684.1-202ENST00000641293 1636 ntBASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 SNORA71.2-201ENST00000364941 134 ntBASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 MIR298-201ENST00000401212 88 ntBASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 GEMIN8P3-201ENST00000445417 720 ntBASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 ISCUP1-201ENST00000454451 448 ntBASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 OR7H2P-201ENST00000513483 306 ntBASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 AP002981.1-201ENST00000517692 975 ntBASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 IGKV1-32-201ENST00000519290 311 ntBASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 AC209154.1-201ENST00000582156 337 ntBASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 HMGB2P1-201ENST00000591146 634 ntBASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 FAM25E-202ENST00000608562 189 ntBASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 BMS1P21-201ENST00000634565 365 ntBASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 AL133243.3-201ENST00000617415 3004 ntBASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 AC108751.5-201ENST00000492880 1336 ntBASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC65Q8IXS2 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 UGT2B26P-201ENST00000508672 1613 ntBASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 AL935212.3-201ENST00000450729 284 ntBASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 SCARNA10-201ENST00000459255 330 ntBASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 RNA5SP464-201ENST00000516251 108 ntBASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 SNORD91B-202ENST00000608459 222 ntBASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 AL049539.1-201ENST00000611964 459 ntBASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 AC123912.3-201ENST00000600907 1367 ntBASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 AC010928.1-201ENST00000592477 1447 ntBASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCDC65Q8IXS2 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 SNORA58B-201ENST00000364259 136 ntBASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 GTF2IP2-201ENST00000424290 697 ntBASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 IPMKP1-201ENST00000425988 855 ntBASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 PPIAP13-201ENST00000434706 478 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms