Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL589826.1-201ENST00000340697 249 ntBASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 AL589655.1-201ENST00000405398 482 ntBASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 AMZ2P2-201ENST00000406819 1057 ntBASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 RN7SKP267-201ENST00000410381 285 ntBASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 AL590623.1-201ENST00000427864 105 ntBASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 CCRL1P1-201ENST00000449542 1053 ntBASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 CEACAMP6-201ENST00000452007 574 ntBASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 AC010326.1-201ENST00000462726 602 ntBASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 AC091544.1-201ENST00000484702 348 ntBASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 RPS23P1-201ENST00000491662 432 ntBASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 AC008897.1-201ENST00000494006 347 ntBASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 PCNAP1-201ENST00000505363 709 ntBASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 DUX4L52-201ENST00000549363 777 ntBASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 SNRPGP1-201ENST00000553864 222 ntBASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 MIR4700-201ENST00000578311 74 ntBASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 RMST_5.1-201ENST00000618704 126 ntBASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 AL136164.3-201ENST00000624429 3978 ntBASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 MFSD8-216ENST00000641147 4009 ntBASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
C9orf40Q8IXQ3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
C9orf40Q8IXQ3 DHX9P1-201ENST00000436565 3076 ntBASIC4.34□□□□□ -1.72
C9orf40Q8IXQ3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.34□□□□□ -1.72
C9orf40Q8IXQ3 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 AL031119.1-201ENST00000404707 1879 ntBASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 AC120338.1-201ENST00000625074 1541 ntBASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 AC012618.3-205ENST00000637896 1496 ntBASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 AL022322.2-201ENST00000624072 20397 ntBASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 AC079741.1-201ENST00000321498 212 ntBASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 AL049697.2-201ENST00000403708 294 ntBASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 RPL37P18-201ENST00000411602 243 ntBASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 MTATP6P19-201ENST00000413797 659 ntBASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 RNF19BPX-201ENST00000426224 625 ntBASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 AL445433.1-201ENST00000457507 257 ntBASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 AC104629.2-201ENST00000468627 598 ntBASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 RN7SL354P-201ENST00000469282 294 ntBASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 RPS29P22-201ENST00000472363 168 ntBASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 RNU6-760P-201ENST00000516078 97 ntBASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 CDH12P4-201ENST00000517835 295 ntBASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 CDH12P3-201ENST00000517935 295 ntBASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 CDH12P1-201ENST00000518435 295 ntBASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 AC074029.2-201ENST00000551045 634 ntBASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 AC012414.2-201ENST00000559474 187 ntBASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 AL133370.2-201ENST00000619934 439 ntBASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 AC107068.1-201ENST00000563286 4218 ntBASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms