Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC115283.1-201ENST00000427353 400 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 AC092634.2-201ENST00000428146 1010 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 FTLP19-201ENST00000433300 394 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 FMO7P-201ENST00000436045 768 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 AC019185.1-201ENST00000442718 389 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 VN1R25P-201ENST00000443385 738 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 AL591719.1-201ENST00000444669 744 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 CYCSP24-201ENST00000445119 316 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 AL050341.1-201ENST00000447743 313 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 AC244505.3-201ENST00000454598 187 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 AC110749.1-201ENST00000462007 357 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 MTCYBP35-201ENST00000503630 1137 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 AC074087.1-201ENST00000512059 724 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 AC104417.1-201ENST00000523974 751 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHFQ7M4L6 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHFQ7M4L6 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHFQ7M4L6 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 RBM22P1-201ENST00000578589 1214 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 AC009597.2-201ENST00000604659 592 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 AC145207.9-201ENST00000623802 325 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 AC073869.10-201ENST00000642016 354 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHFQ7M4L6 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHFQ7M4L6 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHFQ7M4L6 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
SHFQ7M4L6 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHFQ7M4L6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHFQ7M4L6 SAMMSON-213ENST00000641336 1521 ntBASIC4.72□□□□□ -1.65
SHFQ7M4L6 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.71□□□□□ -1.65
SHFQ7M4L6 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SHFQ7M4L6 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.71□□□□□ -1.65
SHFQ7M4L6 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
SHFQ7M4L6 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.71□□□□□ -1.65
SHFQ7M4L6 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHFQ7M4L6 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHFQ7M4L6 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 AC005294.1-201ENST00000355509 281 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHFQ7M4L6 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 OR7E156P-201ENST00000400303 464 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 DNAJC19P6-201ENST00000401853 280 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 MIR1271-201ENST00000408537 86 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 RNU4-22P-201ENST00000411058 166 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 MTND4P3-201ENST00000417829 541 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 CETN4P-201ENST00000432407 469 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 AL161722.2-201ENST00000434731 981 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 DNAJA1P5-201ENST00000440278 943 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 RPS11P7-201ENST00000442125 465 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 AC099063.2-201ENST00000446360 662 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 ZNF886P-201ENST00000450781 723 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 MTCO2P6-201ENST00000463134 685 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHFQ7M4L6 RPL7P40-201ENST00000481703 745 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 RPL37P23-201ENST00000492641 294 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 MTND4LP2-201ENST00000502312 285 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 AC008837.1-201ENST00000511513 412 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SHFQ7M4L6 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms