Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 SNORA62-201ENST00000365493 153 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 RNA5SP241-201ENST00000391326 114 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 HMGB1P10-201ENST00000395823 563 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 MRPL53P1-201ENST00000414323 319 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 HYALP1-201ENST00000417674 1279 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 HMGN2P27-201ENST00000427352 270 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 FO393414.1-201ENST00000428697 1184 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 FO393419.3-201ENST00000428741 282 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 RPL7AP49-201ENST00000429522 581 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AL591438.1-201ENST00000433508 581 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AC006994.1-201ENST00000438212 839 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 HMGB3P9-201ENST00000441799 583 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 RPS27P5-201ENST00000444247 244 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 GAPDHP14-201ENST00000450472 937 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 CYCSP20-201ENST00000473154 315 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AC083982.1-201ENST00000485679 344 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AL049874.2-201ENST00000492636 288 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AC009120.1-201ENST00000493458 473 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 RN7SL591P-201ENST00000496150 292 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AC119751.4-201ENST00000507498 357 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AC016559.2-201ENST00000510759 359 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AC137768.1-201ENST00000549998 553 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AL359219.2-201ENST00000555184 348 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AC040958.1-201ENST00000561102 201 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AC012254.4-201ENST00000588843 273 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AF129408.1-201ENST00000608767 431 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AC245100.7-201ENST00000609678 442 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AC005156.1-201ENST00000613371 573 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AC078880.5-201ENST00000617845 421 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AC022960.3-201ENST00000619794 441 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AC068880.4-201ENST00000623082 495 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AP003476.1-201ENST00000623984 516 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AC011815.3-201ENST00000624194 473 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 MIR7641-1-201ENST00000627518 61 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 AC099654.8-201ENST00000637757 681 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM3Q53GG5 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 RPL23P2-201ENST00000320371 421 ntBASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 RNA5SP305-201ENST00000362665 119 ntBASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 RNU6-1000P-201ENST00000391066 106 ntBASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 PPIAP9-201ENST00000403866 498 ntBASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 OR13Z1P-201ENST00000416141 834 ntBASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 TRGV6-201ENST00000417928 299 ntBASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 AC007161.1-204ENST00000423039 460 ntBASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 DPY19L1P2-201ENST00000426647 915 ntBASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 RPL7L1P9-201ENST00000431298 745 ntBASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 MTCO1P43-201ENST00000431831 488 ntBASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 AC239367.2-201ENST00000447309 705 ntBASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 AC090804.1-201ENST00000448870 490 ntBASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 RPS29P33-201ENST00000456717 146 ntBASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 NIP7P2-201ENST00000485801 544 ntBASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 RPS21P4-201ENST00000487122 248 ntBASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.47□□□□□ -1.69
PDLIM3Q53GG5 RNU6-615P-201ENST00000516065 106 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms