Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 RNA5SP52-201ENST00000362448 134 ntBASIC3.6□□□□□ -1.83
HIST1H1AQ02539 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 AC104297.1-201ENST00000393779 870 ntBASIC3.6□□□□□ -1.83
HIST1H1AQ02539 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 AC093162.1-201ENST00000419682 124 ntBASIC3.6□□□□□ -1.83
HIST1H1AQ02539 AC013268.2-201ENST00000420753 337 ntBASIC3.6□□□□□ -1.83
HIST1H1AQ02539 AC099336.2-201ENST00000422457 254 ntBASIC3.6□□□□□ -1.83
HIST1H1AQ02539 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 RPS17P8-201ENST00000434525 335 ntBASIC3.6□□□□□ -1.83
HIST1H1AQ02539 SLC25A18P1-201ENST00000449385 454 ntBASIC3.6□□□□□ -1.83
HIST1H1AQ02539 AL451050.1-201ENST00000450126 415 ntBASIC3.6□□□□□ -1.83
HIST1H1AQ02539 AC234781.3-201ENST00000452540 973 ntBASIC3.6□□□□□ -1.83
HIST1H1AQ02539 AC016724.1-201ENST00000453215 421 ntBASIC3.6□□□□□ -1.83
HIST1H1AQ02539 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 AC099560.2-201ENST00000457554 255 ntBASIC3.6□□□□□ -1.83
HIST1H1AQ02539 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 IGLVIV-53-201ENST00000520107 367 ntBASIC3.6□□□□□ -1.83
HIST1H1AQ02539 AC013701.1-201ENST00000522657 465 ntBASIC3.6□□□□□ -1.83
HIST1H1AQ02539 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 OR10G5P-201ENST00000532733 358 ntBASIC3.6□□□□□ -1.83
HIST1H1AQ02539 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 HNRNPCP4-201ENST00000571636 900 ntBASIC3.6□□□□□ -1.83
HIST1H1AQ02539 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 MIR3176-201ENST00000582210 90 ntBASIC3.6□□□□□ -1.83
HIST1H1AQ02539 AC020634.1-201ENST00000608701 549 ntBASIC3.6□□□□□ -1.83
HIST1H1AQ02539 AL022401.1-201ENST00000619498 108 ntBASIC3.6□□□□□ -1.83
HIST1H1AQ02539 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HIST1H1AQ02539 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 RNU1-106P-201ENST00000384382 164 ntBASIC3.59□□□□□ -1.83
HIST1H1AQ02539 MIR921-201ENST00000401133 56 ntBASIC3.59□□□□□ -1.83
HIST1H1AQ02539 RPL5P19-201ENST00000404228 893 ntBASIC3.59□□□□□ -1.83
HIST1H1AQ02539 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 RNU2-50P-201ENST00000410494 143 ntBASIC3.59□□□□□ -1.83
HIST1H1AQ02539 RN7SKP216-201ENST00000411050 312 ntBASIC3.59□□□□□ -1.83
HIST1H1AQ02539 GTF2IP5-201ENST00000414608 731 ntBASIC3.59□□□□□ -1.83
HIST1H1AQ02539 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 RPS6P12-201ENST00000432491 726 ntBASIC3.59□□□□□ -1.83
HIST1H1AQ02539 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 AC108022.1-201ENST00000493466 478 ntBASIC3.59□□□□□ -1.83
HIST1H1AQ02539 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 AC090515.3-201ENST00000560431 315 ntBASIC3.59□□□□□ -1.83
HIST1H1AQ02539 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 AL121932.1-201ENST00000605542 214 ntBASIC3.59□□□□□ -1.83
HIST1H1AQ02539 AC010424.2-201ENST00000607594 443 ntBASIC3.59□□□□□ -1.83
HIST1H1AQ02539 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 LINC01739-205ENST00000641890 573 ntBASIC3.59□□□□□ -1.83
HIST1H1AQ02539 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
HIST1H1AQ02539 AC010329.2-201ENST00000595195 2737 ntBASIC3.59□□□□□ -1.83
HIST1H1AQ02539 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HIST1H1AQ02539 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.59□□□□□ -1.84
HIST1H1AQ02539 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HIST1H1AQ02539 AC022893.2-201ENST00000564832 3296 ntBASIC3.59□□□□□ -1.84
HIST1H1AQ02539 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.59□□□□□ -1.84
HIST1H1AQ02539 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 C4BPAP1-201ENST00000415474 1893 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 AC010300.1-201ENST00000600671 5134 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms