Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
CDC42EP1Q00587 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CDC42EP1Q00587 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.82□□□□□ -1.48
CDC42EP1Q00587 AC114774.1-201ENST00000507410 1770 ntBASIC5.82□□□□□ -1.48
CDC42EP1Q00587 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDC42EP1Q00587 AC004076.2-201ENST00000620532 3323 ntBASIC5.82□□□□□ -1.48
CDC42EP1Q00587 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CDC42EP1Q00587 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDC42EP1Q00587 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDC42EP1Q00587 MTND5P31-201ENST00000419366 1374 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AC111188.2-201ENST00000529697 1387 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 THAP12P4-201ENST00000528321 2266 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 RNU6-1214P-201ENST00000363650 109 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 SNORD116-8-201ENST00000384365 95 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 RN7SKP126-201ENST00000411143 300 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AC013404.1-201ENST00000413068 249 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AL008987.1-201ENST00000415528 237 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AC124944.2-201ENST00000429866 1242 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 MTCO1P52-201ENST00000433928 531 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AC016772.1-201ENST00000444170 1261 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AC104634.1-201ENST00000452720 462 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 USP9YP25-201ENST00000457708 443 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 RN7SL197P-201ENST00000466981 299 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AC009127.1-201ENST00000467090 155 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 RPL23AP44-201ENST00000482216 473 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AC010486.3-201ENST00000511602 785 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AP000676.2-201ENST00000529711 301 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 OR8G3P-201ENST00000533406 921 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 MTND4LP24-201ENST00000572277 291 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 MIR3691-201ENST00000578066 90 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AL162431.4-201ENST00000604674 411 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AC016877.3-201ENST00000606778 504 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AC024257.5-201ENST00000612739 531 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AL121594.5-201ENST00000631724 573 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 LINC02211-204ENST00000642024 1070 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 AC107021.2-201ENST00000567714 2095 ntBASIC5.81□□□□□ -1.48
CDC42EP1Q00587 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.81□□□□□ -1.48
CDC42EP1Q00587 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.8□□□□□ -1.48
CDC42EP1Q00587 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CDC42EP1Q00587 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDC42EP1Q00587 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDC42EP1Q00587 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.8□□□□□ -1.48
CDC42EP1Q00587 SEC63P2-201ENST00000503863 1939 ntBASIC5.8□□□□□ -1.48
CDC42EP1Q00587 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.8□□□□□ -1.48
CDC42EP1Q00587 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.8□□□□□ -1.48
CDC42EP1Q00587 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.8□□□□□ -1.48
CDC42EP1Q00587 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDC42EP1Q00587 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
CDC42EP1Q00587 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDC42EP1Q00587 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDC42EP1Q00587 U3.3-201ENST00000362986 216 ntBASIC5.8□□□□□ -1.48
CDC42EP1Q00587 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.8□□□□□ -1.48
CDC42EP1Q00587 RNU6-185P-201ENST00000384421 107 ntBASIC5.8□□□□□ -1.48
CDC42EP1Q00587 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CDC42EP1Q00587 MIR1182-201ENST00000408363 97 ntBASIC5.8□□□□□ -1.48
CDC42EP1Q00587 RN7SKP125-201ENST00000410481 302 ntBASIC5.8□□□□□ -1.48
CDC42EP1Q00587 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.8□□□□□ -1.48
CDC42EP1Q00587 AC093162.1-201ENST00000419682 124 ntBASIC5.8□□□□□ -1.48
CDC42EP1Q00587 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDC42EP1Q00587 RAC1P8-201ENST00000427086 527 ntBASIC5.8□□□□□ -1.48
CDC42EP1Q00587 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDC42EP1Q00587 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDC42EP1Q00587 TXNL1P1-201ENST00000429528 554 ntBASIC5.8□□□□□ -1.48
CDC42EP1Q00587 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.8□□□□□ -1.48
CDC42EP1Q00587 AL645937.3-201ENST00000453647 936 ntBASIC5.8□□□□□ -1.48
CDC42EP1Q00587 SBDSP1-204ENST00000453858 737 ntBASIC5.8□□□□□ -1.48
CDC42EP1Q00587 RNU7-140P-201ENST00000459546 60 ntBASIC5.8□□□□□ -1.48
CDC42EP1Q00587 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.8□□□□□ -1.48
CDC42EP1Q00587 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.8□□□□□ -1.48
CDC42EP1Q00587 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.8□□□□□ -1.48
CDC42EP1Q00587 MTCO3P28-201ENST00000513351 515 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms