Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
H3F3AP84243 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.14□□□□□ -1.75
H3F3AP84243 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
H3F3AP84243 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.13□□□□□ -1.75
H3F3AP84243 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
H3F3AP84243 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
H3F3AP84243 MFSD8-216ENST00000641147 4009 ntBASIC4.13□□□□□ -1.75
H3F3AP84243 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
H3F3AP84243 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
H3F3AP84243 RN7SKP115-201ENST00000363177 317 ntBASIC4.13□□□□□ -1.75
H3F3AP84243 SNORD113.2-201ENST00000364166 89 ntBASIC4.13□□□□□ -1.75
H3F3AP84243 RNU6-1263P-201ENST00000384601 106 ntBASIC4.13□□□□□ -1.75
H3F3AP84243 AL590139.1-201ENST00000416267 400 ntBASIC4.13□□□□□ -1.75
H3F3AP84243 RPL21P43-201ENST00000425440 472 ntBASIC4.13□□□□□ -1.75
H3F3AP84243 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
H3F3AP84243 NPM1P48-201ENST00000436002 853 ntBASIC4.13□□□□□ -1.75
H3F3AP84243 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.13□□□□□ -1.75
H3F3AP84243 YWHAZP2-201ENST00000440317 728 ntBASIC4.13□□□□□ -1.75
H3F3AP84243 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
H3F3AP84243 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.13□□□□□ -1.75
H3F3AP84243 AC108751.2-201ENST00000469993 231 ntBASIC4.13□□□□□ -1.75
H3F3AP84243 AC104763.1-201ENST00000475274 360 ntBASIC4.13□□□□□ -1.75
H3F3AP84243 MTND4LP2-201ENST00000502312 285 ntBASIC4.13□□□□□ -1.75
H3F3AP84243 AK4P6-201ENST00000505168 528 ntBASIC4.13□□□□□ -1.75
H3F3AP84243 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.13□□□□□ -1.75
H3F3AP84243 AC021146.3-201ENST00000511911 260 ntBASIC4.13□□□□□ -1.75
H3F3AP84243 DUX4L52-201ENST00000549363 777 ntBASIC4.13□□□□□ -1.75
H3F3AP84243 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.13□□□□□ -1.75
H3F3AP84243 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.13□□□□□ -1.75
H3F3AP84243 AC116651.1-201ENST00000609724 556 ntBASIC4.13□□□□□ -1.75
H3F3AP84243 AL161616.1-201ENST00000611867 286 ntBASIC4.13□□□□□ -1.75
H3F3AP84243 AC100827.5-201ENST00000615883 426 ntBASIC4.13□□□□□ -1.75
H3F3AP84243 AC244517.3-201ENST00000616254 1235 ntBASIC4.13□□□□□ -1.75
H3F3AP84243 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.13□□□□□ -1.75
H3F3AP84243 AC108751.5-201ENST00000492880 1336 ntBASIC4.13□□□□□ -1.75
H3F3AP84243 OR14L1P-202ENST00000641545 3009 ntBASIC4.13□□□□□ -1.75
H3F3AP84243 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
H3F3AP84243 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
H3F3AP84243 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
H3F3AP84243 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.12□□□□□ -1.75
H3F3AP84243 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.12□□□□□ -1.75
H3F3AP84243 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
H3F3AP84243 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
H3F3AP84243 RLIMP2-201ENST00000427891 1563 ntBASIC4.12□□□□□ -1.75
H3F3AP84243 RNA5SP28-201ENST00000363841 119 ntBASIC4.12□□□□□ -1.75
H3F3AP84243 SEPT7P2-202ENST00000398921 823 ntBASIC4.12□□□□□ -1.75
H3F3AP84243 AL121834.1-202ENST00000404494 277 ntBASIC4.12□□□□□ -1.75
H3F3AP84243 RNU2-50P-201ENST00000410494 143 ntBASIC4.12□□□□□ -1.75
H3F3AP84243 RNA5SP146-201ENST00000410743 123 ntBASIC4.12□□□□□ -1.75
H3F3AP84243 Z74021.1-201ENST00000423610 407 ntBASIC4.12□□□□□ -1.75
H3F3AP84243 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.12□□□□□ -1.75
H3F3AP84243 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.12□□□□□ -1.75
H3F3AP84243 MTND6P18-201ENST00000439477 513 ntBASIC4.12□□□□□ -1.75
H3F3AP84243 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.12□□□□□ -1.75
H3F3AP84243 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.12□□□□□ -1.75
H3F3AP84243 EIF2S2P5-201ENST00000457635 968 ntBASIC4.12□□□□□ -1.75
H3F3AP84243 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.12□□□□□ -1.75
H3F3AP84243 RPL12P20-201ENST00000475538 479 ntBASIC4.12□□□□□ -1.75
H3F3AP84243 NIP7P2-201ENST00000485801 544 ntBASIC4.12□□□□□ -1.75
H3F3AP84243 STMN1P2-201ENST00000508435 439 ntBASIC4.12□□□□□ -1.75
H3F3AP84243 AC125612.1-201ENST00000547580 377 ntBASIC4.12□□□□□ -1.75
H3F3AP84243 AC063949.1-201ENST00000552900 865 ntBASIC4.12□□□□□ -1.75
H3F3AP84243 AC008536.1-201ENST00000602872 669 ntBASIC4.12□□□□□ -1.75
H3F3AP84243 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.12□□□□□ -1.75
H3F3AP84243 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.12□□□□□ -1.75
H3F3AP84243 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
H3F3AP84243 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.12□□□□□ -1.75
H3F3AP84243 AC027290.2-201ENST00000623210 18662 ntBASIC4.12□□□□□ -1.75
H3F3AP84243 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
H3F3AP84243 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
H3F3AP84243 AL355852.1-201ENST00000454081 1771 ntBASIC4.12□□□□□ -1.75
H3F3AP84243 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
H3F3AP84243 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
H3F3AP84243 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
H3F3AP84243 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
H3F3AP84243 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
H3F3AP84243 AL391684.1-202ENST00000641293 1636 ntBASIC4.11□□□□□ -1.75
H3F3AP84243 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
H3F3AP84243 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.11□□□□□ -1.75
H3F3AP84243 OR4K15-201ENST00000305051 1216 ntBASIC4.11□□□□□ -1.75
H3F3AP84243 AC021146.4-201ENST00000309229 279 ntBASIC4.11□□□□□ -1.75
H3F3AP84243 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.11□□□□□ -1.75
H3F3AP84243 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.11□□□□□ -1.75
H3F3AP84243 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.11□□□□□ -1.75
H3F3AP84243 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
H3F3AP84243 RN7SKP106-201ENST00000410832 272 ntBASIC4.11□□□□□ -1.75
H3F3AP84243 RPL21P108-201ENST00000413857 481 ntBASIC4.11□□□□□ -1.75
H3F3AP84243 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.11□□□□□ -1.75
H3F3AP84243 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.11□□□□□ -1.75
H3F3AP84243 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.11□□□□□ -1.75
H3F3AP84243 AC073264.2-201ENST00000448886 166 ntBASIC4.11□□□□□ -1.75
H3F3AP84243 AL935212.3-201ENST00000450729 284 ntBASIC4.11□□□□□ -1.75
H3F3AP84243 CEACAMP6-201ENST00000452007 574 ntBASIC4.11□□□□□ -1.75
H3F3AP84243 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.11□□□□□ -1.75
H3F3AP84243 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
H3F3AP84243 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.11□□□□□ -1.75
H3F3AP84243 AP006289.1-201ENST00000538089 277 ntBASIC4.11□□□□□ -1.75
H3F3AP84243 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.11□□□□□ -1.75
H3F3AP84243 MTND2P17-201ENST00000550281 688 ntBASIC4.11□□□□□ -1.75
H3F3AP84243 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms