Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.3□□□□□ -1.72
CX3CL1P78423 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.3□□□□□ -1.72
CX3CL1P78423 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.3□□□□□ -1.72
CX3CL1P78423 AC127381.1-201ENST00000555979 939 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.3□□□□□ -1.72
CX3CL1P78423 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.3□□□□□ -1.72
CX3CL1P78423 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.3□□□□□ -1.72
CX3CL1P78423 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.3□□□□□ -1.72
CX3CL1P78423 AP005262.1-201ENST00000582646 997 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CX3CL1P78423 EIF1P6-201ENST00000600054 334 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 AP000769.2-201ENST00000602344 396 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 AL160237.3-201ENST00000604114 1013 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 AL589674.2-201ENST00000604304 337 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 BNIP3P4-201ENST00000604946 565 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.3□□□□□ -1.72
CX3CL1P78423 AC000068.2-201ENST00000608816 460 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 AC008115.4-201ENST00000619780 775 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 BX649567.1-201ENST00000642071 1134 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.3□□□□□ -1.72
CX3CL1P78423 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.3□□□□□ -1.72
CX3CL1P78423 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CX3CL1P78423 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CX3CL1P78423 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CX3CL1P78423 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CX3CL1P78423 AC010329.2-201ENST00000595195 2737 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.3□□□□□ -1.72
CX3CL1P78423 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CL1P78423 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.29□□□□□ -1.72
CX3CL1P78423 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CL1P78423 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CX3CL1P78423 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.29□□□□□ -1.72
CX3CL1P78423 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CL1P78423 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CX3CL1P78423 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CX3CL1P78423 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CX3CL1P78423 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CL1P78423 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CL1P78423 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CL1P78423 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CL1P78423 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CX3CL1P78423 AC027228.2-201ENST00000567141 2154 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CL1P78423 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CL1P78423 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
CX3CL1P78423 SMG1P4-204ENST00000523028 4131 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CX3CL1P78423 RNA5SP234-201ENST00000363916 119 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 RNA5SP242-201ENST00000364171 118 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 SNORA48.4-201ENST00000391089 134 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.29□□□□□ -1.72
CX3CL1P78423 AL449283.1-202ENST00000418249 604 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.29□□□□□ -1.72
CX3CL1P78423 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.29□□□□□ -1.72
CX3CL1P78423 HMGB1P45-201ENST00000435986 653 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.29□□□□□ -1.72
CX3CL1P78423 PTGES3P1-201ENST00000439531 483 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 ELOCP10-201ENST00000440624 327 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 YWHAQP9-201ENST00000445891 512 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 AL929288.2-201ENST00000446368 407 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 AL031313.1-201ENST00000448435 256 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.29□□□□□ -1.72
CX3CL1P78423 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.29□□□□□ -1.72
CX3CL1P78423 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.29□□□□□ -1.72
CX3CL1P78423 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.29□□□□□ -1.72
CX3CL1P78423 RPL7P32-201ENST00000457119 744 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.29□□□□□ -1.72
CX3CL1P78423 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.29□□□□□ -1.72
CX3CL1P78423 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.29□□□□□ -1.72
CX3CL1P78423 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.29□□□□□ -1.72
CX3CL1P78423 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.29□□□□□ -1.72
CX3CL1P78423 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.29□□□□□ -1.72
CX3CL1P78423 AC008837.1-201ENST00000511513 412 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.29□□□□□ -1.72
CX3CL1P78423 IGKV2-36-201ENST00000519999 223 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.29□□□□□ -1.72
CX3CL1P78423 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.29□□□□□ -1.72
CX3CL1P78423 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.29□□□□□ -1.72
CX3CL1P78423 AC104417.1-201ENST00000523974 751 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 NDUFS5P6-201ENST00000529136 295 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 OR8G3P-201ENST00000533406 921 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CL1P78423 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.29□□□□□ -1.72
CX3CL1P78423 CYP2C60P-201ENST00000566088 139 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 AC005341.1-201ENST00000571086 708 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 MTCO1P40-201ENST00000574371 625 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.29□□□□□ -1.72
CX3CL1P78423 MTCO2P2-201ENST00000591258 225 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 ELOCP34-201ENST00000604436 327 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
CX3CL1P78423 AC112220.2-201ENST00000605513 533 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 AL157392.4-201ENST00000609756 345 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CL1P78423 MIR8080-201ENST00000622224 89 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 AC135068.5-201ENST00000624197 983 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 ATE1-AS1-202ENST00000636460 506 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CX3CL1P78423 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms