Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC6.15□□□□□ -1.42
EPHB3P54753 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC6.15□□□□□ -1.42
EPHB3P54753 AC074344.1-201ENST00000512823 224 ntBASIC6.15□□□□□ -1.42
EPHB3P54753 RNA5SP362-201ENST00000516048 118 ntBASIC6.15□□□□□ -1.42
EPHB3P54753 RNU6-615P-201ENST00000516065 106 ntBASIC6.15□□□□□ -1.42
EPHB3P54753 SNORA43.3-201ENST00000517240 103 ntBASIC6.15□□□□□ -1.42
EPHB3P54753 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC6.15□□□□□ -1.42
EPHB3P54753 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.15□□□□□ -1.42
EPHB3P54753 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC6.15□□□□□ -1.42
EPHB3P54753 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.15□□□□□ -1.42
EPHB3P54753 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
EPHB3P54753 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.15□□□□□ -1.42
EPHB3P54753 HMGB1P42-201ENST00000532126 553 ntBASIC6.15□□□□□ -1.42
EPHB3P54753 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC6.15□□□□□ -1.42
EPHB3P54753 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC6.15□□□□□ -1.42
EPHB3P54753 TPRKBP2-201ENST00000565969 475 ntBASIC6.15□□□□□ -1.42
EPHB3P54753 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.15□□□□□ -1.42
EPHB3P54753 AP005262.1-201ENST00000582646 997 ntBASIC6.15□□□□□ -1.42
EPHB3P54753 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.15□□□□□ -1.42
EPHB3P54753 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.15□□□□□ -1.42
EPHB3P54753 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.15□□□□□ -1.42
EPHB3P54753 AC104695.2-201ENST00000605056 775 ntBASIC6.15□□□□□ -1.42
EPHB3P54753 AC004890.3-201ENST00000605566 1095 ntBASIC6.15□□□□□ -1.42
EPHB3P54753 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
EPHB3P54753 AL158211.4-201ENST00000606988 584 ntBASIC6.15□□□□□ -1.42
EPHB3P54753 AC004009.2-201ENST00000623016 728 ntBASIC6.15□□□□□ -1.42
EPHB3P54753 AC099654.5-201ENST00000636479 350 ntBASIC6.15□□□□□ -1.42
EPHB3P54753 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
EPHB3P54753 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
EPHB3P54753 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
EPHB3P54753 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
EPHB3P54753 AC006511.3-201ENST00000624929 1783 ntBASIC6.15□□□□□ -1.43
EPHB3P54753 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
EPHB3P54753 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
EPHB3P54753 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
EPHB3P54753 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
EPHB3P54753 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.15□□□□□ -1.43
EPHB3P54753 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
EPHB3P54753 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
EPHB3P54753 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.15□□□□□ -1.43
EPHB3P54753 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
EPHB3P54753 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.15□□□□□ -1.43
EPHB3P54753 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.15□□□□□ -1.43
EPHB3P54753 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
EPHB3P54753 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
EPHB3P54753 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
EPHB3P54753 AL137100.1-201ENST00000556703 1620 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
EPHB3P54753 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
EPHB3P54753 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.14□□□□□ -1.43
EPHB3P54753 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
EPHB3P54753 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.14□□□□□ -1.43
EPHB3P54753 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
EPHB3P54753 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.14□□□□□ -1.43
EPHB3P54753 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.14□□□□□ -1.43
EPHB3P54753 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.14□□□□□ -1.43
EPHB3P54753 BTF3P7-201ENST00000407097 488 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
EPHB3P54753 RNU2-41P-201ENST00000410991 178 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 BMS1P17-202ENST00000416720 316 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 NUP35P2-201ENST00000416748 943 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 USP9YP31-201ENST00000431405 881 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC6.14□□□□□ -1.43
EPHB3P54753 AL590103.1-201ENST00000434488 307 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 AL731534.1-201ENST00000434711 269 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.14□□□□□ -1.43
EPHB3P54753 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.14□□□□□ -1.43
EPHB3P54753 EEF1B2P6-201ENST00000445713 673 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 AC023271.1-201ENST00000445936 1090 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 TPT1P14-201ENST00000448018 505 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 RAB28P3-201ENST00000448325 597 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC6.14□□□□□ -1.43
EPHB3P54753 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.14□□□□□ -1.43
EPHB3P54753 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.14□□□□□ -1.43
EPHB3P54753 AC004924.1-201ENST00000480160 781 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 AC016687.1-201ENST00000482574 353 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.14□□□□□ -1.43
EPHB3P54753 RN7SL466P-201ENST00000497546 295 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.14□□□□□ -1.43
EPHB3P54753 AC138409.2-202ENST00000507274 458 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 AC138866.2-201ENST00000508650 584 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC6.14□□□□□ -1.43
EPHB3P54753 ATP5LP3-201ENST00000514223 304 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 SCARNA6.1-201ENST00000516989 238 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 IGLV3-30-201ENST00000524362 298 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.14□□□□□ -1.43
EPHB3P54753 OR5BC1P-201ENST00000529327 739 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC6.14□□□□□ -1.43
EPHB3P54753 AC012414.6-201ENST00000568241 401 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.14□□□□□ -1.43
EPHB3P54753 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.14□□□□□ -1.43
EPHB3P54753 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.14□□□□□ -1.43
EPHB3P54753 ABBA01006766.1-201ENST00000584728 294 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.14□□□□□ -1.43
EPHB3P54753 AC006539.2-201ENST00000601729 572 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 AC025594.3-201ENST00000613068 790 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC6.14□□□□□ -1.43
EPHB3P54753 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC6.14□□□□□ -1.43
EPHB3P54753 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms