Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 CASC19-255ENST00000641733 1385 ntBASIC6.27□□□□□ -1.41
CLTCL1P53675 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CLTCL1P53675 MIR23B-201ENST00000384832 97 ntBASIC6.27□□□□□ -1.41
CLTCL1P53675 AL590806.1-201ENST00000415818 853 ntBASIC6.27□□□□□ -1.41
CLTCL1P53675 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC6.27□□□□□ -1.41
CLTCL1P53675 COX6B1P7-201ENST00000430845 235 ntBASIC6.27□□□□□ -1.41
CLTCL1P53675 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.27□□□□□ -1.41
CLTCL1P53675 RNA5SP246-201ENST00000458909 119 ntBASIC6.27□□□□□ -1.41
CLTCL1P53675 PPM1AP1-201ENST00000502740 1135 ntBASIC6.27□□□□□ -1.41
CLTCL1P53675 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.27□□□□□ -1.41
CLTCL1P53675 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CLTCL1P53675 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC6.27□□□□□ -1.41
CLTCL1P53675 IGLVVI-25-1-201ENST00000521893 249 ntBASIC6.27□□□□□ -1.41
CLTCL1P53675 RPL23AP97-201ENST00000568955 471 ntBASIC6.27□□□□□ -1.41
CLTCL1P53675 AC138965.3-201ENST00000623875 498 ntBASIC6.27□□□□□ -1.41
CLTCL1P53675 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.27□□□□□ -1.41
CLTCL1P53675 OR8B1P-202ENST00000641132 1178 ntBASIC6.27□□□□□ -1.41
CLTCL1P53675 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLTCL1P53675 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CLTCL1P53675 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CLTCL1P53675 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC6.27□□□□□ -1.41
CLTCL1P53675 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLTCL1P53675 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLTCL1P53675 NXPH1-205ENST00000602349 1953 ntBASIC6.27□□□□□ -1.41
CLTCL1P53675 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CLTCL1P53675 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLTCL1P53675 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CLTCL1P53675 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.26□□□□□ -1.41
CLTCL1P53675 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC6.26□□□□□ -1.41
CLTCL1P53675 CYCSP19-201ENST00000411715 316 ntBASIC6.26□□□□□ -1.41
CLTCL1P53675 AC009237.10-201ENST00000414112 510 ntBASIC6.26□□□□□ -1.41
CLTCL1P53675 AC062016.2-201ENST00000420950 676 ntBASIC6.26□□□□□ -1.41
CLTCL1P53675 RCC2P2-201ENST00000422174 918 ntBASIC6.26□□□□□ -1.41
CLTCL1P53675 YY1P1-201ENST00000427625 668 ntBASIC6.26□□□□□ -1.41
CLTCL1P53675 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.26□□□□□ -1.41
CLTCL1P53675 HMGB3P16-201ENST00000508037 287 ntBASIC6.26□□□□□ -1.41
CLTCL1P53675 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.26□□□□□ -1.41
CLTCL1P53675 MED28P5-201ENST00000528254 438 ntBASIC6.26□□□□□ -1.41
CLTCL1P53675 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC6.26□□□□□ -1.41
CLTCL1P53675 CCDC58P3-201ENST00000590792 430 ntBASIC6.26□□□□□ -1.41
CLTCL1P53675 BNIP3P22-201ENST00000593399 556 ntBASIC6.26□□□□□ -1.41
CLTCL1P53675 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.26□□□□□ -1.41
CLTCL1P53675 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CLTCL1P53675 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLTCL1P53675 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
CLTCL1P53675 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLTCL1P53675 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLTCL1P53675 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLTCL1P53675 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLTCL1P53675 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLTCL1P53675 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CLTCL1P53675 AC025750.1-201ENST00000399891 379 ntBASIC6.25□□□□□ -1.41
CLTCL1P53675 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC6.25□□□□□ -1.41
CLTCL1P53675 EIF4A1P1-201ENST00000420241 934 ntBASIC6.25□□□□□ -1.41
CLTCL1P53675 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC6.25□□□□□ -1.41
CLTCL1P53675 AC034236.1-201ENST00000469891 373 ntBASIC6.25□□□□□ -1.41
CLTCL1P53675 AC010374.1-201ENST00000503762 1237 ntBASIC6.25□□□□□ -1.41
CLTCL1P53675 GLRXP2-201ENST00000555594 321 ntBASIC6.25□□□□□ -1.41
CLTCL1P53675 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CLTCL1P53675 MIR4472-2-201ENST00000582069 67 ntBASIC6.25□□□□□ -1.41
CLTCL1P53675 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.25□□□□□ -1.41
CLTCL1P53675 AC099676.1-201ENST00000608886 657 ntBASIC6.25□□□□□ -1.41
CLTCL1P53675 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLTCL1P53675 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLTCL1P53675 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLTCL1P53675 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CLTCL1P53675 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLTCL1P53675 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLTCL1P53675 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
CLTCL1P53675 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLTCL1P53675 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
CLTCL1P53675 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
CLTCL1P53675 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLTCL1P53675 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CLTCL1P53675 SNORA48.7-201ENST00000391302 135 ntBASIC6.25□□□□□ -1.41
CLTCL1P53675 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLTCL1P53675 GTF3AP5-201ENST00000442645 697 ntBASIC6.25□□□□□ -1.41
CLTCL1P53675 RN7SL604P-201ENST00000492589 296 ntBASIC6.25□□□□□ -1.41
CLTCL1P53675 AC104164.2-201ENST00000496953 495 ntBASIC6.25□□□□□ -1.41
CLTCL1P53675 AL592156.1-201ENST00000508758 304 ntBASIC6.25□□□□□ -1.41
CLTCL1P53675 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC6.25□□□□□ -1.41
CLTCL1P53675 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.25□□□□□ -1.41
CLTCL1P53675 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CLTCL1P53675 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLTCL1P53675 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC6.24□□□□□ -1.41
CLTCL1P53675 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLTCL1P53675 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CLTCL1P53675 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLTCL1P53675 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLTCL1P53675 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
CLTCL1P53675 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.24□□□□□ -1.41
CLTCL1P53675 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLTCL1P53675 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLTCL1P53675 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CLTCL1P53675 OR2AH1P-201ENST00000425717 928 ntBASIC6.24□□□□□ -1.41
CLTCL1P53675 TRGV7-201ENST00000427089 353 ntBASIC6.24□□□□□ -1.41
CLTCL1P53675 SETP4-201ENST00000455717 868 ntBASIC6.24□□□□□ -1.41
CLTCL1P53675 SNORA84-201ENST00000459229 133 ntBASIC6.24□□□□□ -1.41
CLTCL1P53675 AC108751.2-201ENST00000469993 231 ntBASIC6.24□□□□□ -1.41
CLTCL1P53675 RPL23AP37-201ENST00000479658 549 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms