Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AL139124.1-201ENST00000609123 421 ntBASIC5.58□□□□□ -1.52
COPAP53621 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.58□□□□□ -1.52
COPAP53621 BNIP3P41-202ENST00000616656 861 ntBASIC5.58□□□□□ -1.52
COPAP53621 MIR6730-201ENST00000622213 67 ntBASIC5.58□□□□□ -1.52
COPAP53621 AC004232.3-201ENST00000622977 525 ntBASIC5.58□□□□□ -1.52
COPAP53621 AC007342.8-201ENST00000623278 678 ntBASIC5.58□□□□□ -1.52
COPAP53621 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.58□□□□□ -1.52
COPAP53621 AC006963.1-201ENST00000624003 1052 ntBASIC5.58□□□□□ -1.52
COPAP53621 AP000676.4-201ENST00000624659 623 ntBASIC5.58□□□□□ -1.52
COPAP53621 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.58□□□□□ -1.52
COPAP53621 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
COPAP53621 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
COPAP53621 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COPAP53621 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COPAP53621 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COPAP53621 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COPAP53621 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COPAP53621 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COPAP53621 AC010329.2-201ENST00000595195 2737 ntBASIC5.58□□□□□ -1.52
COPAP53621 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COPAP53621 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
COPAP53621 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COPAP53621 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
COPAP53621 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
COPAP53621 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COPAP53621 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COPAP53621 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COPAP53621 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
COPAP53621 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
COPAP53621 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
COPAP53621 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COPAP53621 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.57□□□□□ -1.52
COPAP53621 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
COPAP53621 AC005294.1-201ENST00000355509 281 ntBASIC5.57□□□□□ -1.52
COPAP53621 MIR133B-201ENST00000362210 119 ntBASIC5.57□□□□□ -1.52
COPAP53621 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
COPAP53621 RNA5SP339-201ENST00000390987 122 ntBASIC5.57□□□□□ -1.52
COPAP53621 RPL23AP59-201ENST00000399415 461 ntBASIC5.57□□□□□ -1.52
COPAP53621 AP002530.1-201ENST00000405705 684 ntBASIC5.57□□□□□ -1.52
COPAP53621 AC092638.1-201ENST00000411966 1275 ntBASIC5.57□□□□□ -1.52
COPAP53621 AC013404.1-201ENST00000413068 249 ntBASIC5.57□□□□□ -1.52
COPAP53621 HIGD1AP15-201ENST00000416198 280 ntBASIC5.57□□□□□ -1.52
COPAP53621 AL449283.1-202ENST00000418249 604 ntBASIC5.57□□□□□ -1.52
COPAP53621 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.57□□□□□ -1.52
COPAP53621 AC246680.2-201ENST00000422106 389 ntBASIC5.57□□□□□ -1.52
COPAP53621 AC007161.1-204ENST00000423039 460 ntBASIC5.57□□□□□ -1.52
COPAP53621 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.57□□□□□ -1.52
COPAP53621 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.57□□□□□ -1.52
COPAP53621 AC105399.1-202ENST00000447303 205 ntBASIC5.57□□□□□ -1.52
COPAP53621 FAR2P1-206ENST00000449736 709 ntBASIC5.57□□□□□ -1.52
COPAP53621 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.57□□□□□ -1.52
COPAP53621 AURKAPS1-201ENST00000451805 1212 ntBASIC5.57□□□□□ -1.52
COPAP53621 RPL7P48-201ENST00000461513 746 ntBASIC5.57□□□□□ -1.52
COPAP53621 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.57□□□□□ -1.52
COPAP53621 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.57□□□□□ -1.52
COPAP53621 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.57□□□□□ -1.52
COPAP53621 NDUFA5P12-201ENST00000503796 343 ntBASIC5.57□□□□□ -1.52
COPAP53621 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.57□□□□□ -1.52
COPAP53621 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.57□□□□□ -1.52
COPAP53621 RNU6-1028P-201ENST00000517164 93 ntBASIC5.57□□□□□ -1.52
COPAP53621 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.57□□□□□ -1.52
COPAP53621 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.57□□□□□ -1.52
COPAP53621 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.57□□□□□ -1.52
COPAP53621 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.57□□□□□ -1.52
COPAP53621 AC027455.1-201ENST00000574104 594 ntBASIC5.57□□□□□ -1.52
COPAP53621 MIR548Y-201ENST00000582739 110 ntBASIC5.57□□□□□ -1.52
COPAP53621 AC008536.1-201ENST00000602872 669 ntBASIC5.57□□□□□ -1.52
COPAP53621 AC005377.1-201ENST00000605126 456 ntBASIC5.57□□□□□ -1.52
COPAP53621 AL450336.1-201ENST00000605180 586 ntBASIC5.57□□□□□ -1.52
COPAP53621 AC090525.3-201ENST00000605601 189 ntBASIC5.57□□□□□ -1.52
COPAP53621 AL139407.1-201ENST00000613826 1175 ntBASIC5.57□□□□□ -1.52
COPAP53621 FRG1HP-204ENST00000617940 757 ntBASIC5.57□□□□□ -1.52
COPAP53621 AL121890.3-201ENST00000618494 516 ntBASIC5.57□□□□□ -1.52
COPAP53621 AC118658.2-201ENST00000618697 459 ntBASIC5.57□□□□□ -1.52
COPAP53621 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.57□□□□□ -1.52
COPAP53621 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.57□□□□□ -1.52
COPAP53621 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COPAP53621 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
COPAP53621 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
COPAP53621 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.57□□□□□ -1.52
COPAP53621 GTF2H2B-203ENST00000508065 1432 ntBASIC5.57□□□□□ -1.52
COPAP53621 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.57□□□□□ -1.52
COPAP53621 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
COPAP53621 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.56□□□□□ -1.52
COPAP53621 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COPAP53621 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.56□□□□□ -1.52
COPAP53621 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COPAP53621 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
COPAP53621 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.56□□□□□ -1.52
COPAP53621 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.56□□□□□ -1.52
COPAP53621 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COPAP53621 SNORA16A-201ENST00000384342 137 ntBASIC5.56□□□□□ -1.52
COPAP53621 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
COPAP53621 SNORD65C-201ENST00000390962 71 ntBASIC5.56□□□□□ -1.52
COPAP53621 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.56□□□□□ -1.52
COPAP53621 GTF2IP5-201ENST00000414608 731 ntBASIC5.56□□□□□ -1.52
COPAP53621 LINC01881-201ENST00000416103 412 ntBASIC5.56□□□□□ -1.52
COPAP53621 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.56□□□□□ -1.52
COPAP53621 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.56□□□□□ -1.52
COPAP53621 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms