Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDX1P47902 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDX1P47902 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.35□□□□□ -1.71
CDX1P47902 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.35□□□□□ -1.71
CDX1P47902 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.35□□□□□ -1.71
CDX1P47902 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.35□□□□□ -1.71
CDX1P47902 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.35□□□□□ -1.71
CDX1P47902 AC092162.3-201ENST00000624511 1624 ntBASIC4.35□□□□□ -1.71
CDX1P47902 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDX1P47902 AC114546.3-201ENST00000623582 1734 ntBASIC4.35□□□□□ -1.71
CDX1P47902 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CDX1P47902 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CDX1P47902 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDX1P47902 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDX1P47902 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.34□□□□□ -1.71
CDX1P47902 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CDX1P47902 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDX1P47902 OR1L6-202ENST00000373684 1044 ntBASIC4.34□□□□□ -1.71
CDX1P47902 MIR525-201ENST00000384978 85 ntBASIC4.34□□□□□ -1.71
CDX1P47902 AL391361.1-201ENST00000405580 489 ntBASIC4.34□□□□□ -1.71
CDX1P47902 AL009179.1-201ENST00000406085 265 ntBASIC4.34□□□□□ -1.71
CDX1P47902 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.34□□□□□ -1.71
CDX1P47902 AC007738.1-201ENST00000413892 348 ntBASIC4.34□□□□□ -1.71
CDX1P47902 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDX1P47902 AC019050.1-201ENST00000418508 492 ntBASIC4.34□□□□□ -1.71
CDX1P47902 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.34□□□□□ -1.71
CDX1P47902 RPL12P34-201ENST00000424532 479 ntBASIC4.34□□□□□ -1.71
CDX1P47902 RPL7AP49-201ENST00000429522 581 ntBASIC4.34□□□□□ -1.71
CDX1P47902 TMEM183AP1-205ENST00000432739 290 ntBASIC4.34□□□□□ -1.71
CDX1P47902 AL591438.1-201ENST00000433508 581 ntBASIC4.34□□□□□ -1.71
CDX1P47902 AC012075.1-201ENST00000436549 580 ntBASIC4.34□□□□□ -1.71
CDX1P47902 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.34□□□□□ -1.71
CDX1P47902 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.34□□□□□ -1.71
CDX1P47902 AL390119.1-201ENST00000440329 312 ntBASIC4.34□□□□□ -1.71
CDX1P47902 RPS7P5-201ENST00000441482 581 ntBASIC4.34□□□□□ -1.71
CDX1P47902 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.34□□□□□ -1.71
CDX1P47902 GEMIN8P3-201ENST00000445417 720 ntBASIC4.34□□□□□ -1.71
CDX1P47902 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.34□□□□□ -1.71
CDX1P47902 RN7SL51P-201ENST00000468230 285 ntBASIC4.34□□□□□ -1.71
CDX1P47902 AC100832.1-201ENST00000471945 383 ntBASIC4.34□□□□□ -1.71
CDX1P47902 ATP5LP5-201ENST00000483050 299 ntBASIC4.34□□□□□ -1.71
CDX1P47902 NIP7P2-201ENST00000485801 544 ntBASIC4.34□□□□□ -1.71
CDX1P47902 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDX1P47902 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.34□□□□□ -1.71
CDX1P47902 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.34□□□□□ -1.71
CDX1P47902 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.34□□□□□ -1.71
CDX1P47902 HMGB1P1-201ENST00000522557 636 ntBASIC4.34□□□□□ -1.71
CDX1P47902 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.34□□□□□ -1.71
CDX1P47902 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.34□□□□□ -1.71
CDX1P47902 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDX1P47902 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.34□□□□□ -1.71
CDX1P47902 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDX1P47902 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.34□□□□□ -1.71
CDX1P47902 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.34□□□□□ -1.71
CDX1P47902 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.34□□□□□ -1.71
CDX1P47902 AC095057.3-201ENST00000567102 1157 ntBASIC4.34□□□□□ -1.71
CDX1P47902 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
CDX1P47902 PCNAP1-202ENST00000595299 752 ntBASIC4.34□□□□□ -1.71
CDX1P47902 AC012616.1-201ENST00000600294 197 ntBASIC4.34□□□□□ -1.71
CDX1P47902 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDX1P47902 AC037198.3-201ENST00000616754 526 ntBASIC4.34□□□□□ -1.71
CDX1P47902 MIR6826-201ENST00000617808 98 ntBASIC4.34□□□□□ -1.71
CDX1P47902 MIR8080-201ENST00000622224 89 ntBASIC4.34□□□□□ -1.71
CDX1P47902 AC016717.3-201ENST00000624730 554 ntBASIC4.34□□□□□ -1.71
CDX1P47902 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.34□□□□□ -1.71
CDX1P47902 AC235565.1-201ENST00000456962 1325 ntBASIC4.34□□□□□ -1.71
CDX1P47902 USP9YP4-201ENST00000424401 1745 ntBASIC4.34□□□□□ -1.71
CDX1P47902 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.34□□□□□ -1.71
CDX1P47902 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.34□□□□□ -1.71
CDX1P47902 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.34□□□□□ -1.71
CDX1P47902 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDX1P47902 AL118496.1-201ENST00000440201 1812 ntBASIC4.34□□□□□ -1.71
CDX1P47902 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CDX1P47902 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CDX1P47902 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.34□□□□□ -1.72
CDX1P47902 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
CDX1P47902 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CDX1P47902 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
CDX1P47902 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
CDX1P47902 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.33□□□□□ -1.72
CDX1P47902 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CDX1P47902 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDX1P47902 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
CDX1P47902 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.33□□□□□ -1.72
CDX1P47902 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.33□□□□□ -1.72
CDX1P47902 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDX1P47902 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CDX1P47902 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDX1P47902 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.33□□□□□ -1.72
CDX1P47902 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDX1P47902 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDX1P47902 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDX1P47902 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDX1P47902 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CDX1P47902 RN7SKP224-201ENST00000364140 325 ntBASIC4.33□□□□□ -1.72
CDX1P47902 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.33□□□□□ -1.72
CDX1P47902 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDX1P47902 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.33□□□□□ -1.72
CDX1P47902 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDX1P47902 RPS24P12-201ENST00000402084 394 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms