Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSR1P43307 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.12□□□□□ -1.59
SSR1P43307 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSR1P43307 AC005033.1-201ENST00000428904 813 ntBASIC5.12□□□□□ -1.59
SSR1P43307 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.12□□□□□ -1.59
SSR1P43307 FTH1P6-201ENST00000430768 320 ntBASIC5.12□□□□□ -1.59
SSR1P43307 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.12□□□□□ -1.59
SSR1P43307 ARL4AP3-201ENST00000441452 574 ntBASIC5.12□□□□□ -1.59
SSR1P43307 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.12□□□□□ -1.59
SSR1P43307 EIF2S2P4-201ENST00000461070 984 ntBASIC5.12□□□□□ -1.59
SSR1P43307 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.12□□□□□ -1.59
SSR1P43307 RN7SKP147-201ENST00000517154 244 ntBASIC5.12□□□□□ -1.59
SSR1P43307 Y_RNA.719-201ENST00000517156 106 ntBASIC5.12□□□□□ -1.59
SSR1P43307 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SSR1P43307 AC026688.1-201ENST00000520639 1168 ntBASIC5.12□□□□□ -1.59
SSR1P43307 AC022616.2-201ENST00000523185 300 ntBASIC5.12□□□□□ -1.59
SSR1P43307 HNRNPRP2-201ENST00000528421 743 ntBASIC5.12□□□□□ -1.59
SSR1P43307 OR10G5P-201ENST00000532733 358 ntBASIC5.12□□□□□ -1.59
SSR1P43307 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSR1P43307 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.12□□□□□ -1.59
SSR1P43307 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSR1P43307 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.12□□□□□ -1.59
SSR1P43307 AC006116.3-201ENST00000592968 361 ntBASIC5.12□□□□□ -1.59
SSR1P43307 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.12□□□□□ -1.59
SSR1P43307 AC096586.2-201ENST00000610260 441 ntBASIC5.12□□□□□ -1.59
SSR1P43307 uc_338.32-201ENST00000615087 172 ntBASIC5.12□□□□□ -1.59
SSR1P43307 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.12□□□□□ -1.59
SSR1P43307 AL136164.3-201ENST00000624429 3978 ntBASIC5.12□□□□□ -1.59
SSR1P43307 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSR1P43307 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSR1P43307 AC068254.2-201ENST00000623938 3577 ntBASIC5.12□□□□□ -1.59
SSR1P43307 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SSR1P43307 AL590763.1-201ENST00000398297 1545 ntBASIC5.12□□□□□ -1.59
SSR1P43307 CASC19-281ENST00000642118 1554 ntBASIC5.12□□□□□ -1.59
SSR1P43307 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.12□□□□□ -1.59
SSR1P43307 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSR1P43307 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSR1P43307 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SSR1P43307 AC008758.3-201ENST00000507003 1829 ntBASIC5.11□□□□□ -1.59
SSR1P43307 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SSR1P43307 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSR1P43307 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SSR1P43307 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.11□□□□□ -1.59
SSR1P43307 GTF3AP1-201ENST00000416942 1004 ntBASIC5.11□□□□□ -1.59
SSR1P43307 AC093162.1-201ENST00000419682 124 ntBASIC5.11□□□□□ -1.59
SSR1P43307 EIF4A1P1-201ENST00000420241 934 ntBASIC5.11□□□□□ -1.59
SSR1P43307 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.11□□□□□ -1.59
SSR1P43307 TRGV7-201ENST00000427089 353 ntBASIC5.11□□□□□ -1.59
SSR1P43307 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.11□□□□□ -1.59
SSR1P43307 RPS26P4-201ENST00000431743 355 ntBASIC5.11□□□□□ -1.59
SSR1P43307 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.11□□□□□ -1.59
SSR1P43307 RN7SL517P-201ENST00000462240 305 ntBASIC5.11□□□□□ -1.59
SSR1P43307 AP000926.1-201ENST00000479573 241 ntBASIC5.11□□□□□ -1.59
SSR1P43307 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SSR1P43307 AC113398.2-201ENST00000507630 558 ntBASIC5.11□□□□□ -1.59
SSR1P43307 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.11□□□□□ -1.59
SSR1P43307 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.11□□□□□ -1.59
SSR1P43307 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.11□□□□□ -1.59
SSR1P43307 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.11□□□□□ -1.59
SSR1P43307 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.11□□□□□ -1.59
SSR1P43307 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.11□□□□□ -1.59
SSR1P43307 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.11□□□□□ -1.59
SSR1P43307 HAUS8P1-201ENST00000549005 542 ntBASIC5.11□□□□□ -1.59
SSR1P43307 AL049839.1-201ENST00000556151 657 ntBASIC5.11□□□□□ -1.59
SSR1P43307 AC115989.2-201ENST00000578640 563 ntBASIC5.11□□□□□ -1.59
SSR1P43307 SNORA35B-201ENST00000607417 129 ntBASIC5.11□□□□□ -1.59
SSR1P43307 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.11□□□□□ -1.59
SSR1P43307 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.11□□□□□ -1.59
SSR1P43307 AC021106.3-201ENST00000623925 531 ntBASIC5.11□□□□□ -1.59
SSR1P43307 AP003400.2-201ENST00000624036 666 ntBASIC5.11□□□□□ -1.59
SSR1P43307 Z98755.1-201ENST00000407015 1384 ntBASIC5.11□□□□□ -1.59
SSR1P43307 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SSR1P43307 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.11□□□□□ -1.59
SSR1P43307 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
SSR1P43307 C4BPAP1-201ENST00000415474 1893 ntBASIC5.11□□□□□ -1.59
SSR1P43307 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SSR1P43307 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSR1P43307 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SSR1P43307 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSR1P43307 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SSR1P43307 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.1□□□□□ -1.59
SSR1P43307 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.1□□□□□ -1.59
SSR1P43307 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SSR1P43307 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSR1P43307 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSR1P43307 RN7SKP104-201ENST00000362605 328 ntBASIC5.1□□□□□ -1.59
SSR1P43307 SNORA62.2-201ENST00000364672 152 ntBASIC5.1□□□□□ -1.59
SSR1P43307 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.1□□□□□ -1.59
SSR1P43307 RNU1-106P-201ENST00000384382 164 ntBASIC5.1□□□□□ -1.59
SSR1P43307 RPL21P108-201ENST00000413857 481 ntBASIC5.1□□□□□ -1.59
SSR1P43307 TMBIM7P-201ENST00000418074 855 ntBASIC5.1□□□□□ -1.59
SSR1P43307 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.1□□□□□ -1.59
SSR1P43307 EIF4HP2-201ENST00000424380 563 ntBASIC5.1□□□□□ -1.59
SSR1P43307 AC099654.2-201ENST00000433031 1980 ntBASIC5.1□□□□□ -1.59
SSR1P43307 AC004938.1-201ENST00000438468 308 ntBASIC5.1□□□□□ -1.59
SSR1P43307 AC000111.2-201ENST00000448200 210 ntBASIC5.1□□□□□ -1.59
SSR1P43307 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.1□□□□□ -1.59
SSR1P43307 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.1□□□□□ -1.59
SSR1P43307 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.1□□□□□ -1.59
SSR1P43307 AC092045.1-201ENST00000495716 1231 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms