Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.4□□□□□ -1.71
RFC3P40938 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.4□□□□□ -1.71
RFC3P40938 RNU2-30P-201ENST00000516209 141 ntBASIC4.4□□□□□ -1.71
RFC3P40938 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.4□□□□□ -1.71
RFC3P40938 OR5M2P-201ENST00000529003 936 ntBASIC4.4□□□□□ -1.71
RFC3P40938 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RFC3P40938 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFC3P40938 CD24P2-201ENST00000565486 219 ntBASIC4.4□□□□□ -1.71
RFC3P40938 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.4□□□□□ -1.71
RFC3P40938 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.4□□□□□ -1.71
RFC3P40938 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.4□□□□□ -1.71
RFC3P40938 AC022726.1-201ENST00000587475 207 ntBASIC4.4□□□□□ -1.71
RFC3P40938 AF230666.2-201ENST00000602328 725 ntBASIC4.4□□□□□ -1.71
RFC3P40938 MIR6780A-201ENST00000615089 68 ntBASIC4.4□□□□□ -1.71
RFC3P40938 MIR8069-1-201ENST00000616627 86 ntBASIC4.4□□□□□ -1.71
RFC3P40938 LINC00901.1-201ENST00000617252 152 ntBASIC4.4□□□□□ -1.71
RFC3P40938 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.4□□□□□ -1.71
RFC3P40938 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.4□□□□□ -1.71
RFC3P40938 MIR8069-2-201ENST00000621412 86 ntBASIC4.4□□□□□ -1.71
RFC3P40938 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RFC3P40938 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.4□□□□□ -1.71
RFC3P40938 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.4□□□□□ -1.71
RFC3P40938 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
RFC3P40938 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFC3P40938 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RFC3P40938 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RFC3P40938 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFC3P40938 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
RFC3P40938 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RFC3P40938 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RFC3P40938 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.39□□□□□ -1.71
RFC3P40938 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RFC3P40938 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.39□□□□□ -1.71
RFC3P40938 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RFC3P40938 AC007382.1-201ENST00000624376 2618 ntBASIC4.39□□□□□ -1.71
RFC3P40938 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.39□□□□□ -1.71
RFC3P40938 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RFC3P40938 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RFC3P40938 RNU1-82P-201ENST00000390851 165 ntBASIC4.39□□□□□ -1.71
RFC3P40938 RPL5P19-201ENST00000404228 893 ntBASIC4.39□□□□□ -1.71
RFC3P40938 AL121834.1-202ENST00000404494 277 ntBASIC4.39□□□□□ -1.71
RFC3P40938 AC114755.2-201ENST00000413520 361 ntBASIC4.39□□□□□ -1.71
RFC3P40938 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.39□□□□□ -1.71
RFC3P40938 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.39□□□□□ -1.71
RFC3P40938 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.39□□□□□ -1.71
RFC3P40938 GTF2IP2-201ENST00000424290 697 ntBASIC4.39□□□□□ -1.71
RFC3P40938 MTCO3P17-201ENST00000443775 513 ntBASIC4.39□□□□□ -1.71
RFC3P40938 NPM1P39-201ENST00000449818 867 ntBASIC4.39□□□□□ -1.71
RFC3P40938 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.39□□□□□ -1.71
RFC3P40938 AL445433.1-201ENST00000457507 257 ntBASIC4.39□□□□□ -1.71
RFC3P40938 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.39□□□□□ -1.71
RFC3P40938 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.39□□□□□ -1.71
RFC3P40938 DYNLL1P4-201ENST00000549314 266 ntBASIC4.39□□□□□ -1.71
RFC3P40938 AP000919.1-201ENST00000582850 985 ntBASIC4.39□□□□□ -1.71
RFC3P40938 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.39□□□□□ -1.71
RFC3P40938 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.39□□□□□ -1.71
RFC3P40938 AC104687.2-201ENST00000604442 342 ntBASIC4.39□□□□□ -1.71
RFC3P40938 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.39□□□□□ -1.71
RFC3P40938 AC010424.2-201ENST00000607594 443 ntBASIC4.39□□□□□ -1.71
RFC3P40938 AL135786.2-201ENST00000608422 615 ntBASIC4.39□□□□□ -1.71
RFC3P40938 MIR6810-201ENST00000622701 70 ntBASIC4.39□□□□□ -1.71
RFC3P40938 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RFC3P40938 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.39□□□□□ -1.71
RFC3P40938 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RFC3P40938 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.39□□□□□ -1.71
RFC3P40938 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.39□□□□□ -1.71
RFC3P40938 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RFC3P40938 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RFC3P40938 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RFC3P40938 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.38□□□□□ -1.71
RFC3P40938 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RFC3P40938 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.38□□□□□ -1.71
RFC3P40938 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.38□□□□□ -1.71
RFC3P40938 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RFC3P40938 SALL4P2-201ENST00000423288 2910 ntBASIC4.38□□□□□ -1.71
RFC3P40938 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RFC3P40938 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.38□□□□□ -1.71
RFC3P40938 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.38□□□□□ -1.71
RFC3P40938 BX510359.2-201ENST00000417920 305 ntBASIC4.38□□□□□ -1.71
RFC3P40938 EIF4A1P1-201ENST00000420241 934 ntBASIC4.38□□□□□ -1.71
RFC3P40938 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.38□□□□□ -1.71
RFC3P40938 DNAJC19P7-201ENST00000428811 344 ntBASIC4.38□□□□□ -1.71
RFC3P40938 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.38□□□□□ -1.71
RFC3P40938 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RFC3P40938 CEACAMP6-201ENST00000452007 574 ntBASIC4.38□□□□□ -1.71
RFC3P40938 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.38□□□□□ -1.71
RFC3P40938 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.38□□□□□ -1.71
RFC3P40938 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RFC3P40938 RPL23AP37-201ENST00000479658 549 ntBASIC4.38□□□□□ -1.71
RFC3P40938 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.38□□□□□ -1.71
RFC3P40938 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.38□□□□□ -1.71
RFC3P40938 AC111000.3-201ENST00000508057 576 ntBASIC4.38□□□□□ -1.71
RFC3P40938 AC091868.1-201ENST00000508746 304 ntBASIC4.38□□□□□ -1.71
RFC3P40938 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.38□□□□□ -1.71
RFC3P40938 AC026688.1-201ENST00000520639 1168 ntBASIC4.38□□□□□ -1.71
RFC3P40938 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.38□□□□□ -1.71
RFC3P40938 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RFC3P40938 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.38□□□□□ -1.71
RFC3P40938 MTND2P13-201ENST00000577438 1039 ntBASIC4.38□□□□□ -1.71
RFC3P40938 AC018695.5-201ENST00000605872 315 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms