Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.82□□□□□ -1.48
TM4SF1P30408 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.82□□□□□ -1.48
TM4SF1P30408 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
TM4SF1P30408 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.82□□□□□ -1.48
TM4SF1P30408 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.82□□□□□ -1.48
TM4SF1P30408 FKBP1BP1-201ENST00000553366 325 ntBASIC5.82□□□□□ -1.48
TM4SF1P30408 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.82□□□□□ -1.48
TM4SF1P30408 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.82□□□□□ -1.48
TM4SF1P30408 PRELID3BP3-201ENST00000584963 545 ntBASIC5.82□□□□□ -1.48
TM4SF1P30408 AC090948.2-201ENST00000607363 564 ntBASIC5.82□□□□□ -1.48
TM4SF1P30408 MIR92B-201ENST00000607575 96 ntBASIC5.82□□□□□ -1.48
TM4SF1P30408 AL352984.2-202ENST00000613699 155 ntBASIC5.82□□□□□ -1.48
TM4SF1P30408 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.82□□□□□ -1.48
TM4SF1P30408 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.82□□□□□ -1.48
TM4SF1P30408 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.82□□□□□ -1.48
TM4SF1P30408 MIR492-201ENST00000638676 116 ntBASIC5.82□□□□□ -1.48
TM4SF1P30408 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TM4SF1P30408 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.82□□□□□ -1.48
TM4SF1P30408 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TM4SF1P30408 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TM4SF1P30408 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TM4SF1P30408 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.82□□□□□ -1.48
TM4SF1P30408 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
TM4SF1P30408 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.81□□□□□ -1.48
TM4SF1P30408 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TM4SF1P30408 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.81□□□□□ -1.48
TM4SF1P30408 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.81□□□□□ -1.48
TM4SF1P30408 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.81□□□□□ -1.48
TM4SF1P30408 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
TM4SF1P30408 RNA5SP366-201ENST00000365454 123 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 RNU1-13P-201ENST00000384499 162 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 MIR23A-201ENST00000385245 73 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 RPS26P8-201ENST00000393490 348 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 GSTA12P-201ENST00000402398 508 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.81□□□□□ -1.48
TM4SF1P30408 RNA5SP317-201ENST00000410176 116 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 RNA5SP311-201ENST00000411290 116 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.81□□□□□ -1.48
TM4SF1P30408 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TM4SF1P30408 RPL34P6-201ENST00000432390 345 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 AC007563.3-201ENST00000433233 371 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 ZFAND6P1-201ENST00000434138 605 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 HMGB3P10-201ENST00000434734 572 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 RN7SL98P-201ENST00000462271 300 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 AC023424.1-201ENST00000496058 459 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.81□□□□□ -1.48
TM4SF1P30408 SAP18P1-201ENST00000512058 390 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.81□□□□□ -1.48
TM4SF1P30408 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.81□□□□□ -1.48
TM4SF1P30408 AC016550.3-201ENST00000515706 767 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 RNA5SP315-201ENST00000516340 116 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 RNA5SP312-201ENST00000517068 116 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 MIR2116-201ENST00000517221 80 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 AC067904.2-201ENST00000517322 1283 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.81□□□□□ -1.48
TM4SF1P30408 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.81□□□□□ -1.48
TM4SF1P30408 OR10D4P-201ENST00000525892 951 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TM4SF1P30408 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.81□□□□□ -1.48
TM4SF1P30408 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.81□□□□□ -1.48
TM4SF1P30408 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.81□□□□□ -1.48
TM4SF1P30408 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.81□□□□□ -1.48
TM4SF1P30408 CCDC58P3-201ENST00000590792 430 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 AP004372.1-201ENST00000604842 844 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 AC019080.5-201ENST00000624891 757 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 MIR3653-201ENST00000625572 110 ntBASIC5.81□□□□□ -1.48
TM4SF1P30408 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.81□□□□□ -1.48
TM4SF1P30408 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.81□□□□□ -1.48
TM4SF1P30408 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
TM4SF1P30408 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
TM4SF1P30408 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.81□□□□□ -1.48
TM4SF1P30408 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.81□□□□□ -1.48
TM4SF1P30408 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.81□□□□□ -1.48
TM4SF1P30408 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
TM4SF1P30408 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TM4SF1P30408 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.8□□□□□ -1.48
TM4SF1P30408 DNM1P47-203ENST00000571780 12667 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TM4SF1P30408 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TM4SF1P30408 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TM4SF1P30408 AP005432.1-201ENST00000580891 3485 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
TM4SF1P30408 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.8□□□□□ -1.48
TM4SF1P30408 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TM4SF1P30408 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TM4SF1P30408 RNU6-729P-201ENST00000384399 107 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 SDHCP2-201ENST00000398565 501 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 ARL4AP5-201ENST00000404372 599 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 AL445189.1-201ENST00000405722 338 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 RPL23AP26-201ENST00000412728 464 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.8□□□□□ -1.48
TM4SF1P30408 MTCYBP7-201ENST00000419540 1134 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 FAR1P1-201ENST00000427163 934 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 AP001324.1-201ENST00000428553 399 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 ACTR3P2-201ENST00000439585 1257 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 ARAFP2-201ENST00000440565 559 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 TDGF1P1-201ENST00000445734 527 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 MRPL35P2-201ENST00000448009 511 ntBASIC5.8□□□□□ -1.48
TM4SF1P30408 AC090142.1-201ENST00000465776 462 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms