Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AL353600.1-201ENST00000608148 251 ntBASIC4.41□□□□□ -1.7
SHC1P29353 AC009269.6-201ENST00000621778 588 ntBASIC4.41□□□□□ -1.7
SHC1P29353 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.41□□□□□ -1.7
SHC1P29353 AC097372.4-201ENST00000625025 466 ntBASIC4.41□□□□□ -1.7
SHC1P29353 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHC1P29353 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHC1P29353 AC097461.1-201ENST00000568928 2821 ntBASIC4.41□□□□□ -1.7
SHC1P29353 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SHC1P29353 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SHC1P29353 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHC1P29353 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.41□□□□□ -1.7
SHC1P29353 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.41□□□□□ -1.7
SHC1P29353 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHC1P29353 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SHC1P29353 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SHC1P29353 SAMMSON-226ENST00000642089 1582 ntBASIC4.4□□□□□ -1.7
SHC1P29353 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
SHC1P29353 AC008758.3-201ENST00000507003 1829 ntBASIC4.4□□□□□ -1.7
SHC1P29353 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.4□□□□□ -1.7
SHC1P29353 MIR550A3-201ENST00000390735 95 ntBASIC4.4□□□□□ -1.71
SHC1P29353 HMGB3P7-201ENST00000400214 611 ntBASIC4.4□□□□□ -1.71
SHC1P29353 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.4□□□□□ -1.71
SHC1P29353 AP000580.1-201ENST00000404439 358 ntBASIC4.4□□□□□ -1.71
SHC1P29353 SNORA11B-201ENST00000408175 129 ntBASIC4.4□□□□□ -1.71
SHC1P29353 RN7SKP199-201ENST00000410325 305 ntBASIC4.4□□□□□ -1.71
SHC1P29353 AC002524.1-201ENST00000411687 547 ntBASIC4.4□□□□□ -1.71
SHC1P29353 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.4□□□□□ -1.71
SHC1P29353 AC004074.1-201ENST00000421810 1063 ntBASIC4.4□□□□□ -1.71
SHC1P29353 SFR1P2-201ENST00000421841 730 ntBASIC4.4□□□□□ -1.71
SHC1P29353 AL445528.1-201ENST00000426330 420 ntBASIC4.4□□□□□ -1.71
SHC1P29353 AC104837.2-201ENST00000427236 424 ntBASIC4.4□□□□□ -1.71
SHC1P29353 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.4□□□□□ -1.71
SHC1P29353 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.4□□□□□ -1.71
SHC1P29353 MRPS33P4-201ENST00000434892 317 ntBASIC4.4□□□□□ -1.71
SHC1P29353 AL138787.1-202ENST00000437804 898 ntBASIC4.4□□□□□ -1.71
SHC1P29353 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.4□□□□□ -1.71
SHC1P29353 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SHC1P29353 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SHC1P29353 RPL31P44-201ENST00000447680 377 ntBASIC4.4□□□□□ -1.71
SHC1P29353 MTND2P25-201ENST00000449028 610 ntBASIC4.4□□□□□ -1.71
SHC1P29353 RPS3AP53-201ENST00000454716 778 ntBASIC4.4□□□□□ -1.71
SHC1P29353 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.4□□□□□ -1.71
SHC1P29353 RPL7P16-201ENST00000479738 738 ntBASIC4.4□□□□□ -1.71
SHC1P29353 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SHC1P29353 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.4□□□□□ -1.71
SHC1P29353 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.4□□□□□ -1.71
SHC1P29353 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.4□□□□□ -1.71
SHC1P29353 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.4□□□□□ -1.71
SHC1P29353 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.4□□□□□ -1.71
SHC1P29353 RNU6-760P-201ENST00000516078 97 ntBASIC4.4□□□□□ -1.71
SHC1P29353 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.4□□□□□ -1.71
SHC1P29353 AP001922.4-201ENST00000526967 290 ntBASIC4.4□□□□□ -1.71
SHC1P29353 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.4□□□□□ -1.71
SHC1P29353 DUX4L52-201ENST00000549363 777 ntBASIC4.4□□□□□ -1.71
SHC1P29353 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.4□□□□□ -1.71
SHC1P29353 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.4□□□□□ -1.71
SHC1P29353 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.4□□□□□ -1.71
SHC1P29353 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.4□□□□□ -1.71
SHC1P29353 AL031320.1-201ENST00000604177 357 ntBASIC4.4□□□□□ -1.71
SHC1P29353 AL158062.1-201ENST00000619632 745 ntBASIC4.4□□□□□ -1.71
SHC1P29353 AP006248.3-201ENST00000623580 594 ntBASIC4.4□□□□□ -1.71
SHC1P29353 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.4□□□□□ -1.71
SHC1P29353 NEAT1-202ENST00000501122 22743 ntBASIC4.4□□□□□ -1.71
SHC1P29353 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.4□□□□□ -1.71
SHC1P29353 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SHC1P29353 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SHC1P29353 MTCO1P15-201ENST00000529569 1526 ntBASIC4.4□□□□□ -1.71
SHC1P29353 SAMMSON-213ENST00000641336 1521 ntBASIC4.4□□□□□ -1.71
SHC1P29353 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.4□□□□□ -1.71
SHC1P29353 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.4□□□□□ -1.71
SHC1P29353 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.39□□□□□ -1.71
SHC1P29353 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
SHC1P29353 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.39□□□□□ -1.71
SHC1P29353 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.39□□□□□ -1.71
SHC1P29353 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.39□□□□□ -1.71
SHC1P29353 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SHC1P29353 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHC1P29353 AC008549.2-201ENST00000333482 706 ntBASIC4.39□□□□□ -1.71
SHC1P29353 MIR620-201ENST00000385232 95 ntBASIC4.39□□□□□ -1.71
SHC1P29353 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHC1P29353 RSL24D1P1-201ENST00000404972 493 ntBASIC4.39□□□□□ -1.71
SHC1P29353 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.39□□□□□ -1.71
SHC1P29353 RNA5SP345-201ENST00000410646 108 ntBASIC4.39□□□□□ -1.71
SHC1P29353 MTND4P11-201ENST00000417020 1058 ntBASIC4.39□□□□□ -1.71
SHC1P29353 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.39□□□□□ -1.71
SHC1P29353 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.39□□□□□ -1.71
SHC1P29353 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHC1P29353 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHC1P29353 AC073464.3-201ENST00000422564 712 ntBASIC4.39□□□□□ -1.71
SHC1P29353 AJ239321.1-201ENST00000424255 564 ntBASIC4.39□□□□□ -1.71
SHC1P29353 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.39□□□□□ -1.71
SHC1P29353 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.39□□□□□ -1.71
SHC1P29353 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.39□□□□□ -1.71
SHC1P29353 OR52J1P-201ENST00000450596 932 ntBASIC4.39□□□□□ -1.71
SHC1P29353 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.39□□□□□ -1.71
SHC1P29353 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
SHC1P29353 GAPDHP56-201ENST00000506031 988 ntBASIC4.39□□□□□ -1.71
SHC1P29353 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.39□□□□□ -1.71
SHC1P29353 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.39□□□□□ -1.71
SHC1P29353 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms