Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.99□□□□□ -1.61
ABCD3P28288 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.99□□□□□ -1.61
ABCD3P28288 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
ABCD3P28288 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ABCD3P28288 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 ABCC13-202ENST00000463099 3842 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ABCD3P28288 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.98□□□□□ -1.61
ABCD3P28288 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.98□□□□□ -1.61
ABCD3P28288 AC100757.1-201ENST00000616872 1835 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.98□□□□□ -1.61
ABCD3P28288 RNU6-353P-201ENST00000364266 108 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 MIR323B-201ENST00000385269 82 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
ABCD3P28288 DBIP1-201ENST00000401435 260 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 RPL31P52-201ENST00000407532 367 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 AL390774.1-201ENST00000411924 246 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.98□□□□□ -1.61
ABCD3P28288 GAPDHP49-201ENST00000421421 961 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.98□□□□□ -1.61
ABCD3P28288 RPL12P34-201ENST00000424532 479 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 AL158073.1-201ENST00000426848 1104 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.98□□□□□ -1.61
ABCD3P28288 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.98□□□□□ -1.61
ABCD3P28288 CFL1P1-202ENST00000432948 411 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.98□□□□□ -1.61
ABCD3P28288 RPL12P46-201ENST00000436610 195 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 UBE2V1P5-201ENST00000440070 405 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.98□□□□□ -1.61
ABCD3P28288 GAPDHP25-201ENST00000447061 1001 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.98□□□□□ -1.61
ABCD3P28288 AC092905.1-201ENST00000467527 949 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 AC091959.2-201ENST00000477363 321 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.98□□□□□ -1.61
ABCD3P28288 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.98□□□□□ -1.61
ABCD3P28288 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.98□□□□□ -1.61
ABCD3P28288 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.98□□□□□ -1.61
ABCD3P28288 IGJP1-201ENST00000522682 475 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 HMGB1P40-201ENST00000525121 540 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 OR8I1P-201ENST00000529291 931 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 AP004607.2-201ENST00000533949 322 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.98□□□□□ -1.61
ABCD3P28288 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ABCD3P28288 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.98□□□□□ -1.61
ABCD3P28288 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.98□□□□□ -1.61
ABCD3P28288 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.98□□□□□ -1.61
ABCD3P28288 AC087897.1-201ENST00000550134 156 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.98□□□□□ -1.61
ABCD3P28288 MTCO1P40-201ENST00000574371 625 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
ABCD3P28288 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.98□□□□□ -1.61
ABCD3P28288 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.98□□□□□ -1.61
ABCD3P28288 RN7SL356P-201ENST00000582228 248 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.98□□□□□ -1.61
ABCD3P28288 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.98□□□□□ -1.61
ABCD3P28288 FKBP1AP1-201ENST00000594588 318 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.98□□□□□ -1.61
ABCD3P28288 AL353726.1-201ENST00000614041 1000 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 AC007786.3-201ENST00000615154 596 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 MIR6133-201ENST00000617057 108 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 MIR6837-201ENST00000620884 64 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 AC023510.2-201ENST00000622162 746 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
ABCD3P28288 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ABCD3P28288 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
ABCD3P28288 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ABCD3P28288 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ABCD3P28288 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.98□□□□□ -1.61
ABCD3P28288 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ABCD3P28288 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.98□□□□□ -1.61
ABCD3P28288 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ABCD3P28288 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ABCD3P28288 AC005005.4-201ENST00000623789 16698 ntBASIC4.98□□□□□ -1.61
ABCD3P28288 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
ABCD3P28288 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.97□□□□□ -1.61
ABCD3P28288 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.97□□□□□ -1.61
ABCD3P28288 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
ABCD3P28288 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
ABCD3P28288 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
ABCD3P28288 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
ABCD3P28288 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ABCD3P28288 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
ABCD3P28288 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.97□□□□□ -1.61
ABCD3P28288 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.97□□□□□ -1.61
ABCD3P28288 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ABCD3P28288 ANKRD36P1-201ENST00000344424 659 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
ABCD3P28288 RNA5SP339-201ENST00000390987 122 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
ABCD3P28288 ZNF602P-201ENST00000405929 924 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.97□□□□□ -1.61
ABCD3P28288 AC019050.1-201ENST00000418508 492 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 AL136231.1-201ENST00000429407 730 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 MTCYBP15-201ENST00000433123 1127 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.97□□□□□ -1.61
ABCD3P28288 PTGES3P1-201ENST00000439531 483 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 RPS26P30-201ENST00000443431 335 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 AL358794.1-201ENST00000445689 381 ntBASIC4.97□□□□□ -1.61
ABCD3P28288 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms