Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USF1P22415 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.12□□□□□ -1.75
USF1P22415 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
USF1P22415 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.12□□□□□ -1.75
USF1P22415 ECM1P2-201ENST00000503354 1577 ntBASIC4.12□□□□□ -1.75
USF1P22415 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.12□□□□□ -1.75
USF1P22415 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.12□□□□□ -1.75
USF1P22415 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.12□□□□□ -1.75
USF1P22415 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.12□□□□□ -1.75
USF1P22415 BX510359.2-201ENST00000417920 305 ntBASIC4.12□□□□□ -1.75
USF1P22415 AC069213.2-201ENST00000420238 366 ntBASIC4.12□□□□□ -1.75
USF1P22415 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.12□□□□□ -1.75
USF1P22415 AL359265.2-201ENST00000434367 631 ntBASIC4.12□□□□□ -1.75
USF1P22415 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.12□□□□□ -1.75
USF1P22415 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.12□□□□□ -1.75
USF1P22415 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.12□□□□□ -1.75
USF1P22415 AL157385.1-201ENST00000446973 268 ntBASIC4.12□□□□□ -1.75
USF1P22415 PTMAP3-201ENST00000447474 330 ntBASIC4.12□□□□□ -1.75
USF1P22415 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.12□□□□□ -1.75
USF1P22415 AC010326.1-201ENST00000462726 602 ntBASIC4.12□□□□□ -1.75
USF1P22415 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.12□□□□□ -1.75
USF1P22415 AC116562.1-201ENST00000485355 781 ntBASIC4.12□□□□□ -1.75
USF1P22415 RN7SL441P-201ENST00000492388 296 ntBASIC4.12□□□□□ -1.75
USF1P22415 AC073073.1-201ENST00000493920 463 ntBASIC4.12□□□□□ -1.75
USF1P22415 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.12□□□□□ -1.75
USF1P22415 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.12□□□□□ -1.75
USF1P22415 RN7SKP92-201ENST00000517266 244 ntBASIC4.12□□□□□ -1.75
USF1P22415 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.12□□□□□ -1.75
USF1P22415 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.12□□□□□ -1.75
USF1P22415 SOX5P1-201ENST00000524155 1127 ntBASIC4.12□□□□□ -1.75
USF1P22415 AC109635.6-201ENST00000525487 1113 ntBASIC4.12□□□□□ -1.75
USF1P22415 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.12□□□□□ -1.75
USF1P22415 AP000919.1-201ENST00000582850 985 ntBASIC4.12□□□□□ -1.75
USF1P22415 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.12□□□□□ -1.75
USF1P22415 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.12□□□□□ -1.75
USF1P22415 MIR7703-201ENST00000620784 77 ntBASIC4.12□□□□□ -1.75
USF1P22415 AC015722.2-201ENST00000622210 551 ntBASIC4.12□□□□□ -1.75
USF1P22415 AC021106.3-201ENST00000623925 531 ntBASIC4.12□□□□□ -1.75
USF1P22415 AP003499.2-201ENST00000624100 483 ntBASIC4.12□□□□□ -1.75
USF1P22415 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
USF1P22415 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.12□□□□□ -1.75
USF1P22415 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.12□□□□□ -1.75
USF1P22415 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
USF1P22415 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
USF1P22415 AL022393.1-201ENST00000625142 1677 ntBASIC4.12□□□□□ -1.75
USF1P22415 MFSD8-216ENST00000641147 4009 ntBASIC4.12□□□□□ -1.75
USF1P22415 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.12□□□□□ -1.75
USF1P22415 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.12□□□□□ -1.75
USF1P22415 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
USF1P22415 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USF1P22415 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
USF1P22415 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
USF1P22415 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
USF1P22415 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.11□□□□□ -1.75
USF1P22415 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
USF1P22415 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.11□□□□□ -1.75
USF1P22415 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.11□□□□□ -1.75
USF1P22415 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
USF1P22415 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.11□□□□□ -1.75
USF1P22415 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
USF1P22415 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
USF1P22415 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
USF1P22415 RNU4-7P-201ENST00000364758 141 ntBASIC4.11□□□□□ -1.75
USF1P22415 ATP5HP3-201ENST00000396994 486 ntBASIC4.11□□□□□ -1.75
USF1P22415 AC114755.2-201ENST00000413520 361 ntBASIC4.11□□□□□ -1.75
USF1P22415 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.11□□□□□ -1.75
USF1P22415 AC093084.1-201ENST00000424233 687 ntBASIC4.11□□□□□ -1.75
USF1P22415 OR2AH1P-201ENST00000425717 928 ntBASIC4.11□□□□□ -1.75
USF1P22415 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.11□□□□□ -1.75
USF1P22415 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.11□□□□□ -1.75
USF1P22415 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.11□□□□□ -1.75
USF1P22415 AP000936.3-201ENST00000438127 255 ntBASIC4.11□□□□□ -1.75
USF1P22415 GSTA7P-201ENST00000438425 448 ntBASIC4.11□□□□□ -1.75
USF1P22415 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.11□□□□□ -1.75
USF1P22415 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
USF1P22415 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.11□□□□□ -1.75
USF1P22415 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.11□□□□□ -1.75
USF1P22415 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.11□□□□□ -1.75
USF1P22415 AC022795.1-201ENST00000473808 480 ntBASIC4.11□□□□□ -1.75
USF1P22415 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.11□□□□□ -1.75
USF1P22415 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.11□□□□□ -1.75
USF1P22415 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.11□□□□□ -1.75
USF1P22415 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.11□□□□□ -1.75
USF1P22415 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.11□□□□□ -1.75
USF1P22415 RNU6-319P-201ENST00000516025 108 ntBASIC4.11□□□□□ -1.75
USF1P22415 AC012339.2-201ENST00000523996 453 ntBASIC4.11□□□□□ -1.75
USF1P22415 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.11□□□□□ -1.75
USF1P22415 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.11□□□□□ -1.75
USF1P22415 MIR5096-201ENST00000583713 70 ntBASIC4.11□□□□□ -1.75
USF1P22415 RPL26P30-202ENST00000602923 645 ntBASIC4.11□□□□□ -1.75
USF1P22415 AC104687.2-201ENST00000604442 342 ntBASIC4.11□□□□□ -1.75
USF1P22415 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.11□□□□□ -1.75
USF1P22415 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.11□□□□□ -1.75
USF1P22415 CR381572.2-201ENST00000624852 397 ntBASIC4.11□□□□□ -1.75
USF1P22415 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.11□□□□□ -1.75
USF1P22415 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
USF1P22415 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
USF1P22415 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
USF1P22415 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
USF1P22415 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms