Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.79□□□□□ -1.48
ATF4P18848 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ATF4P18848 AL731556.1-201ENST00000394628 3711 ntBASIC5.79□□□□□ -1.48
ATF4P18848 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.79□□□□□ -1.48
ATF4P18848 AC125336.1-201ENST00000508893 2827 ntBASIC5.79□□□□□ -1.48
ATF4P18848 CDY7P-201ENST00000429883 1604 ntBASIC5.79□□□□□ -1.48
ATF4P18848 RPL12P13-201ENST00000310055 497 ntBASIC5.79□□□□□ -1.48
ATF4P18848 RN7SKP50-201ENST00000364694 315 ntBASIC5.79□□□□□ -1.48
ATF4P18848 RNY4P34-201ENST00000364779 95 ntBASIC5.79□□□□□ -1.48
ATF4P18848 MSRB1P1-201ENST00000396851 354 ntBASIC5.79□□□□□ -1.48
ATF4P18848 PEX12P1-201ENST00000400284 1048 ntBASIC5.79□□□□□ -1.48
ATF4P18848 MTND1P21-201ENST00000412991 285 ntBASIC5.79□□□□□ -1.48
ATF4P18848 RPL31P45-201ENST00000419532 356 ntBASIC5.79□□□□□ -1.48
ATF4P18848 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.79□□□□□ -1.48
ATF4P18848 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.79□□□□□ -1.48
ATF4P18848 AL035410.1-201ENST00000427409 427 ntBASIC5.79□□□□□ -1.48
ATF4P18848 PRPS1P2-201ENST00000430496 937 ntBASIC5.79□□□□□ -1.48
ATF4P18848 AL139415.2-201ENST00000431968 163 ntBASIC5.79□□□□□ -1.48
ATF4P18848 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.79□□□□□ -1.48
ATF4P18848 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.79□□□□□ -1.48
ATF4P18848 UBE2V1P8-201ENST00000437166 265 ntBASIC5.79□□□□□ -1.48
ATF4P18848 AC231532.1-201ENST00000438584 312 ntBASIC5.79□□□□□ -1.48
ATF4P18848 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.79□□□□□ -1.48
ATF4P18848 SDCBPP1-201ENST00000440192 890 ntBASIC5.79□□□□□ -1.48
ATF4P18848 MTND4P18-201ENST00000447010 465 ntBASIC5.79□□□□□ -1.48
ATF4P18848 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC5.79□□□□□ -1.48
ATF4P18848 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.79□□□□□ -1.48
ATF4P18848 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC5.79□□□□□ -1.48
ATF4P18848 GYG1P1-201ENST00000460864 698 ntBASIC5.79□□□□□ -1.48
ATF4P18848 RN7SL379P-201ENST00000479912 293 ntBASIC5.79□□□□□ -1.48
ATF4P18848 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.79□□□□□ -1.48
ATF4P18848 AC091133.4-201ENST00000511142 308 ntBASIC5.79□□□□□ -1.48
ATF4P18848 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.79□□□□□ -1.48
ATF4P18848 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.79□□□□□ -1.48
ATF4P18848 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.79□□□□□ -1.48
ATF4P18848 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.79□□□□□ -1.48
ATF4P18848 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.79□□□□□ -1.48
ATF4P18848 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC5.79□□□□□ -1.48
ATF4P18848 PPIAP6-201ENST00000557078 499 ntBASIC5.79□□□□□ -1.48
ATF4P18848 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.79□□□□□ -1.48
ATF4P18848 AL157394.1-201ENST00000562983 1224 ntBASIC5.79□□□□□ -1.48
ATF4P18848 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC5.79□□□□□ -1.48
ATF4P18848 AC234778.2-201ENST00000566241 354 ntBASIC5.79□□□□□ -1.48
ATF4P18848 UBE2FP2-201ENST00000566646 462 ntBASIC5.79□□□□□ -1.48
ATF4P18848 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.79□□□□□ -1.48
ATF4P18848 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.79□□□□□ -1.48
ATF4P18848 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.79□□□□□ -1.48
ATF4P18848 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC5.79□□□□□ -1.48
ATF4P18848 AL353997.4-201ENST00000586196 166 ntBASIC5.79□□□□□ -1.48
ATF4P18848 NRBF2P1-201ENST00000587407 859 ntBASIC5.79□□□□□ -1.48
ATF4P18848 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC5.79□□□□□ -1.48
ATF4P18848 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.79□□□□□ -1.48
ATF4P18848 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
ATF4P18848 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.79□□□□□ -1.48
ATF4P18848 AC005479.3-201ENST00000602790 431 ntBASIC5.79□□□□□ -1.48
ATF4P18848 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC5.79□□□□□ -1.48
ATF4P18848 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.79□□□□□ -1.48
ATF4P18848 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.79□□□□□ -1.48
ATF4P18848 AC090517.2-201ENST00000614966 680 ntBASIC5.79□□□□□ -1.48
ATF4P18848 AC068234.2-201ENST00000619646 522 ntBASIC5.79□□□□□ -1.48
ATF4P18848 PISRT1-201ENST00000626175 531 ntBASIC5.79□□□□□ -1.48
ATF4P18848 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC5.79□□□□□ -1.48
ATF4P18848 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.79□□□□□ -1.48
ATF4P18848 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.79□□□□□ -1.48
ATF4P18848 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATF4P18848 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATF4P18848 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.79□□□□□ -1.48
ATF4P18848 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
ATF4P18848 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ATF4P18848 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATF4P18848 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ATF4P18848 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ATF4P18848 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATF4P18848 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATF4P18848 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATF4P18848 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
ATF4P18848 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
ATF4P18848 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
ATF4P18848 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.78□□□□□ -1.48
ATF4P18848 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.78□□□□□ -1.48
ATF4P18848 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
ATF4P18848 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ATF4P18848 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.78□□□□□ -1.48
ATF4P18848 RNU6-853P-201ENST00000364306 107 ntBASIC5.78□□□□□ -1.48
ATF4P18848 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
ATF4P18848 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ATF4P18848 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.78□□□□□ -1.48
ATF4P18848 MIR575-201ENST00000385013 94 ntBASIC5.78□□□□□ -1.48
ATF4P18848 PDCL3P5-201ENST00000398028 722 ntBASIC5.78□□□□□ -1.48
ATF4P18848 RPL31P1-201ENST00000398116 372 ntBASIC5.78□□□□□ -1.48
ATF4P18848 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ATF4P18848 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC5.78□□□□□ -1.48
ATF4P18848 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.78□□□□□ -1.48
ATF4P18848 BTF3P7-201ENST00000407097 488 ntBASIC5.78□□□□□ -1.48
ATF4P18848 BCRP8-201ENST00000412037 255 ntBASIC5.78□□□□□ -1.48
ATF4P18848 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ATF4P18848 AC004986.1-201ENST00000414855 607 ntBASIC5.78□□□□□ -1.48
ATF4P18848 AL358176.3-201ENST00000420757 454 ntBASIC5.78□□□□□ -1.48
ATF4P18848 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.78□□□□□ -1.48
ATF4P18848 FDPSP1-201ENST00000424976 1071 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms