Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC7.61□□□□□ -1.19
TOP2AP11388 DNM1P47-203ENST00000571780 12667 ntBASIC7.61□□□□□ -1.19
TOP2AP11388 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TOP2AP11388 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC7.61□□□□□ -1.19
TOP2AP11388 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
TOP2AP11388 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.61□□□□□ -1.19
TOP2AP11388 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC7.61□□□□□ -1.19
TOP2AP11388 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
TOP2AP11388 RNA5SP124-201ENST00000362739 110 ntBASIC7.61□□□□□ -1.19
TOP2AP11388 RNA5SP513-201ENST00000364648 118 ntBASIC7.61□□□□□ -1.19
TOP2AP11388 RN7SKP167-201ENST00000411047 285 ntBASIC7.61□□□□□ -1.19
TOP2AP11388 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC7.61□□□□□ -1.19
TOP2AP11388 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC7.61□□□□□ -1.19
TOP2AP11388 AC146944.2-203ENST00000502493 354 ntBASIC7.61□□□□□ -1.19
TOP2AP11388 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC7.61□□□□□ -1.19
TOP2AP11388 AC139495.1-202ENST00000513164 354 ntBASIC7.61□□□□□ -1.19
TOP2AP11388 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC7.61□□□□□ -1.19
TOP2AP11388 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC7.61□□□□□ -1.19
TOP2AP11388 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TOP2AP11388 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
TOP2AP11388 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC7.6□□□□□ -1.19
TOP2AP11388 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TOP2AP11388 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TOP2AP11388 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.6□□□□□ -1.19
TOP2AP11388 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
TOP2AP11388 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC7.6□□□□□ -1.19
TOP2AP11388 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TOP2AP11388 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC7.6□□□□□ -1.19
TOP2AP11388 RNU11-4P-201ENST00000391149 133 ntBASIC7.6□□□□□ -1.19
TOP2AP11388 AC115285.1-201ENST00000424879 736 ntBASIC7.6□□□□□ -1.19
TOP2AP11388 ARAFP2-201ENST00000440565 559 ntBASIC7.6□□□□□ -1.19
TOP2AP11388 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC7.6□□□□□ -1.19
TOP2AP11388 CREM-230ENST00000474931 626 ntTSL 2 BASIC7.6□□□□□ -1.19
TOP2AP11388 AC069304.1-201ENST00000491593 704 ntBASIC7.6□□□□□ -1.19
TOP2AP11388 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC7.6□□□□□ -1.19
TOP2AP11388 NPM1P41-201ENST00000512920 831 ntBASIC7.6□□□□□ -1.19
TOP2AP11388 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC7.6□□□□□ -1.19
TOP2AP11388 RNA5SP497-201ENST00000516081 97 ntBASIC7.6□□□□□ -1.19
TOP2AP11388 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC7.6□□□□□ -1.19
TOP2AP11388 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC7.6□□□□□ -1.19
TOP2AP11388 AL356863.1-201ENST00000623378 1080 ntBASIC7.6□□□□□ -1.19
TOP2AP11388 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TOP2AP11388 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC7.6□□□□□ -1.19
TOP2AP11388 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
TOP2AP11388 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.6□□□□□ -1.19
TOP2AP11388 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC7.6□□□□□ -1.19
TOP2AP11388 AC068870.3-201ENST00000625077 2536 ntBASIC7.59□□□□□ -1.19
TOP2AP11388 ARHGAP42P1-201ENST00000507474 1976 ntBASIC7.59□□□□□ -1.19
TOP2AP11388 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TOP2AP11388 AL356968.2-201ENST00000412769 1257 ntBASIC7.59□□□□□ -1.19
TOP2AP11388 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TOP2AP11388 SERPINA7P1-201ENST00000443077 631 ntBASIC7.59□□□□□ -1.19
TOP2AP11388 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC7.59□□□□□ -1.19
TOP2AP11388 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC7.59□□□□□ -1.19
TOP2AP11388 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TOP2AP11388 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC7.59□□□□□ -1.19
TOP2AP11388 AC104164.2-201ENST00000496953 495 ntBASIC7.59□□□□□ -1.19
TOP2AP11388 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC7.59□□□□□ -1.19
TOP2AP11388 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC7.59□□□□□ -1.19
TOP2AP11388 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC7.59□□□□□ -1.19
TOP2AP11388 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC7.59□□□□□ -1.19
TOP2AP11388 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC7.59□□□□□ -1.19
TOP2AP11388 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.59□□□□□ -1.19
TOP2AP11388 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC7.59□□□□□ -1.19
TOP2AP11388 Z98200.1-201ENST00000607298 470 ntBASIC7.59□□□□□ -1.19
TOP2AP11388 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TOP2AP11388 NXPH1-205ENST00000602349 1953 ntBASIC7.59□□□□□ -1.19
TOP2AP11388 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC7.59□□□□□ -1.19
TOP2AP11388 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TOP2AP11388 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC7.59□□□□□ -1.19
TOP2AP11388 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TOP2AP11388 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
TOP2AP11388 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.59□□□□□ -1.2
TOP2AP11388 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TOP2AP11388 NAP1L4P1-201ENST00000319092 1157 ntBASIC7.58□□□□□ -1.2
TOP2AP11388 SNORA71.3-201ENST00000362582 128 ntBASIC7.58□□□□□ -1.2
TOP2AP11388 RNU1-83P-201ENST00000363426 164 ntBASIC7.58□□□□□ -1.2
TOP2AP11388 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TOP2AP11388 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC7.58□□□□□ -1.2
TOP2AP11388 RNA5SP249-201ENST00000516127 99 ntBASIC7.58□□□□□ -1.2
TOP2AP11388 TVP23BP1-201ENST00000557500 617 ntBASIC7.58□□□□□ -1.2
TOP2AP11388 AGGF1P6-201ENST00000569213 976 ntBASIC7.58□□□□□ -1.2
TOP2AP11388 AL160290.3-201ENST00000604869 165 ntBASIC7.58□□□□□ -1.2
TOP2AP11388 AC112484.5-201ENST00000624189 228 ntBASIC7.58□□□□□ -1.2
TOP2AP11388 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC7.58□□□□□ -1.2
TOP2AP11388 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC7.58□□□□□ -1.2
TOP2AP11388 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
TOP2AP11388 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TOP2AP11388 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.58□□□□□ -1.2
TOP2AP11388 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC7.58□□□□□ -1.2
TOP2AP11388 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC7.57□□□□□ -1.2
TOP2AP11388 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC7.57□□□□□ -1.2
TOP2AP11388 RPL23AP2-201ENST00000471227 466 ntBASIC7.57□□□□□ -1.2
TOP2AP11388 AC023632.4-201ENST00000517783 191 ntBASIC7.57□□□□□ -1.2
TOP2AP11388 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC7.57□□□□□ -1.2
TOP2AP11388 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC7.57□□□□□ -1.2
TOP2AP11388 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC7.57□□□□□ -1.2
TOP2AP11388 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC7.57□□□□□ -1.2
TOP2AP11388 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC7.57□□□□□ -1.2
TOP2AP11388 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms