Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.06□□□□□ -1.76
FREM3P0C091 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.06□□□□□ -1.76
FREM3P0C091 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FREM3P0C091 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FREM3P0C091 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FREM3P0C091 RPL32P3-201ENST00000359025 275 ntBASIC4.06□□□□□ -1.76
FREM3P0C091 AL590762.2-201ENST00000395798 571 ntBASIC4.06□□□□□ -1.76
FREM3P0C091 COX6CP17-201ENST00000421389 185 ntBASIC4.06□□□□□ -1.76
FREM3P0C091 AL691449.1-201ENST00000426570 421 ntBASIC4.06□□□□□ -1.76
FREM3P0C091 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.06□□□□□ -1.76
FREM3P0C091 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.06□□□□□ -1.76
FREM3P0C091 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.06□□□□□ -1.76
FREM3P0C091 RN7SL691P-201ENST00000494487 301 ntBASIC4.06□□□□□ -1.76
FREM3P0C091 AC105233.3-201ENST00000531125 744 ntBASIC4.06□□□□□ -1.76
FREM3P0C091 AP001804.2-201ENST00000533932 910 ntBASIC4.06□□□□□ -1.76
FREM3P0C091 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
FREM3P0C091 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.06□□□□□ -1.76
FREM3P0C091 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
FREM3P0C091 AC074050.1-201ENST00000563247 211 ntBASIC4.06□□□□□ -1.76
FREM3P0C091 RPL26P30-202ENST00000602923 645 ntBASIC4.06□□□□□ -1.76
FREM3P0C091 AC020910.2-201ENST00000603635 610 ntBASIC4.06□□□□□ -1.76
FREM3P0C091 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.06□□□□□ -1.76
FREM3P0C091 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FREM3P0C091 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.06□□□□□ -1.76
FREM3P0C091 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FREM3P0C091 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
FREM3P0C091 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.05□□□□□ -1.76
FREM3P0C091 AC104260.2-201ENST00000623551 3497 ntBASIC4.05□□□□□ -1.76
FREM3P0C091 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FREM3P0C091 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
FREM3P0C091 RNA5SP307-201ENST00000362863 116 ntBASIC4.05□□□□□ -1.76
FREM3P0C091 AL592293.2-201ENST00000422292 996 ntBASIC4.05□□□□□ -1.76
FREM3P0C091 AC004975.1-201ENST00000428733 208 ntBASIC4.05□□□□□ -1.76
FREM3P0C091 RPL7P33-201ENST00000444159 742 ntBASIC4.05□□□□□ -1.76
FREM3P0C091 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.05□□□□□ -1.76
FREM3P0C091 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
FREM3P0C091 AC105137.1-201ENST00000484355 562 ntBASIC4.05□□□□□ -1.76
FREM3P0C091 AC111000.3-201ENST00000508057 576 ntBASIC4.05□□□□□ -1.76
FREM3P0C091 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.05□□□□□ -1.76
FREM3P0C091 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.05□□□□□ -1.76
FREM3P0C091 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.05□□□□□ -1.76
FREM3P0C091 AL356218.2-201ENST00000605264 187 ntBASIC4.05□□□□□ -1.76
FREM3P0C091 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FREM3P0C091 AC105105.5-201ENST00000622635 1294 ntBASIC4.05□□□□□ -1.76
FREM3P0C091 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FREM3P0C091 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.05□□□□□ -1.76
FREM3P0C091 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FREM3P0C091 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
FREM3P0C091 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
FREM3P0C091 RNA5SP151-201ENST00000365632 117 ntBASIC4.04□□□□□ -1.76
FREM3P0C091 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FREM3P0C091 C4BPAP2-201ENST00000428434 478 ntBASIC4.04□□□□□ -1.76
FREM3P0C091 RN7SL817P-201ENST00000480777 288 ntBASIC4.04□□□□□ -1.76
FREM3P0C091 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.04□□□□□ -1.76
FREM3P0C091 AC093524.1-201ENST00000564266 1094 ntBASIC4.04□□□□□ -1.76
FREM3P0C091 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.04□□□□□ -1.76
FREM3P0C091 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.04□□□□□ -1.76
FREM3P0C091 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
FREM3P0C091 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
FREM3P0C091 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.04□□□□□ -1.76
FREM3P0C091 EOGT-210ENST00000615922 1931 ntBASIC4.04□□□□□ -1.76
FREM3P0C091 CASC19-204ENST00000641001 2055 ntBASIC4.04□□□□□ -1.76
FREM3P0C091 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FREM3P0C091 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FREM3P0C091 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FREM3P0C091 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
FREM3P0C091 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FREM3P0C091 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FREM3P0C091 PCAT14-202ENST00000627127 3935 ntBASIC4.04□□□□□ -1.76
FREM3P0C091 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FREM3P0C091 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
FREM3P0C091 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.04□□□□□ -1.76
FREM3P0C091 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FREM3P0C091 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FREM3P0C091 AL732292.1-201ENST00000426692 226 ntBASIC4.04□□□□□ -1.76
FREM3P0C091 AC114755.5-201ENST00000447760 831 ntBASIC4.04□□□□□ -1.76
FREM3P0C091 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.04□□□□□ -1.76
FREM3P0C091 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.04□□□□□ -1.76
FREM3P0C091 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FREM3P0C091 TOMM20P2-201ENST00000540082 421 ntBASIC4.04□□□□□ -1.76
FREM3P0C091 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.04□□□□□ -1.76
FREM3P0C091 AC017104.4-201ENST00000636283 1592 ntBASIC4.04□□□□□ -1.76
FREM3P0C091 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.03□□□□□ -1.76
FREM3P0C091 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
FREM3P0C091 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
FREM3P0C091 MAPK10-349ENST00000641767 3661 ntBASIC4.03□□□□□ -1.76
FREM3P0C091 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.03□□□□□ -1.76
FREM3P0C091 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
FREM3P0C091 MIR129-1-201ENST00000384972 72 ntBASIC4.03□□□□□ -1.76
FREM3P0C091 EI24P3-201ENST00000399046 1062 ntBASIC4.03□□□□□ -1.76
FREM3P0C091 RPL21P65-201ENST00000406094 466 ntBASIC4.03□□□□□ -1.76
FREM3P0C091 RPS20P14-201ENST00000412545 360 ntBASIC4.03□□□□□ -1.76
FREM3P0C091 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.03□□□□□ -1.76
FREM3P0C091 RSL24D1P6-201ENST00000426934 401 ntBASIC4.03□□□□□ -1.76
FREM3P0C091 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.03□□□□□ -1.76
FREM3P0C091 KATNBL1P2-201ENST00000433311 835 ntBASIC4.03□□□□□ -1.76
FREM3P0C091 AC012671.1-201ENST00000451912 203 ntBASIC4.03□□□□□ -1.76
FREM3P0C091 MTND4LP2-201ENST00000502312 285 ntBASIC4.03□□□□□ -1.76
FREM3P0C091 AC098799.3-201ENST00000506095 438 ntBASIC4.03□□□□□ -1.76
FREM3P0C091 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms