Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 UBE2V2P1-201ENST00000434717 398 ntBASIC4.12□□□□□ -1.75
HLA-DPB1P04440 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 RPL5P30-201ENST00000465511 891 ntBASIC4.12□□□□□ -1.75
HLA-DPB1P04440 RN7SL826P-201ENST00000479724 288 ntBASIC4.12□□□□□ -1.75
HLA-DPB1P04440 RPL7P16-201ENST00000479738 738 ntBASIC4.12□□□□□ -1.75
HLA-DPB1P04440 AC098583.1-201ENST00000480875 255 ntBASIC4.12□□□□□ -1.75
HLA-DPB1P04440 GAPDHP56-201ENST00000506031 988 ntBASIC4.12□□□□□ -1.75
HLA-DPB1P04440 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 AC006499.6-201ENST00000511169 607 ntBASIC4.12□□□□□ -1.75
HLA-DPB1P04440 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.12□□□□□ -1.75
HLA-DPB1P04440 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 MIR4436B2-201ENST00000581415 91 ntBASIC4.12□□□□□ -1.75
HLA-DPB1P04440 MIR4436B1-201ENST00000583272 91 ntBASIC4.12□□□□□ -1.75
HLA-DPB1P04440 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 AP002884.5-201ENST00000595053 1132 ntBASIC4.12□□□□□ -1.75
HLA-DPB1P04440 AL031320.1-201ENST00000604177 357 ntBASIC4.12□□□□□ -1.75
HLA-DPB1P04440 AC138473.1-201ENST00000605717 526 ntBASIC4.12□□□□□ -1.75
HLA-DPB1P04440 AL451049.1-201ENST00000608672 497 ntBASIC4.12□□□□□ -1.75
HLA-DPB1P04440 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 MTND5P23-201ENST00000430812 1655 ntBASIC4.12□□□□□ -1.75
HLA-DPB1P04440 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AC112255.1-201ENST00000624070 2493 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 RNA5SP52-201ENST00000362448 134 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 RNU1-44P-201ENST00000384453 163 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 GAPDHP15-201ENST00000398586 975 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 VDAC2P1-201ENST00000399358 958 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 VN1R8P-201ENST00000407739 893 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 RNA5SP104-201ENST00000410989 118 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AL590762.4-201ENST00000425885 253 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 FTLP19-201ENST00000433300 394 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 MAPRE1P3-201ENST00000435438 796 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AC239798.3-201ENST00000454459 408 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AC063943.1-201ENST00000465434 453 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AC090142.1-201ENST00000465776 462 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 RNU1-6P-201ENST00000516290 144 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 IGLV3-26-201ENST00000520756 302 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 BUD31P1-201ENST00000521828 359 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AP001922.4-201ENST00000526967 290 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AP000676.2-201ENST00000529711 301 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AC133555.2-201ENST00000550213 292 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AL121839.1-201ENST00000556233 1185 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AC009117.1-201ENST00000563948 554 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 MIR3934-201ENST00000579806 107 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 FAM27B-201ENST00000610601 213 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AL138721.1-201ENST00000616756 179 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AL445528.2-201ENST00000620582 470 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AC091905.2-201ENST00000623143 306 ntBASIC4.11□□□□□ -1.75
HLA-DPB1P04440 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DPB1P04440 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DPB1P04440 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DPB1P04440 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DPB1P04440 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HLA-DPB1P04440 Y_RNA.62-201ENST00000362840 99 ntBASIC4.1□□□□□ -1.75
HLA-DPB1P04440 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DPB1P04440 U3.30-201ENST00000391308 210 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms