Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ZKSCAN7P1-201ENST00000543668 673 ntBASIC7.32□□□□□ -1.24
RAPGEF3O95398 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.32□□□□□ -1.24
RAPGEF3O95398 MIR3158-1-201ENST00000583596 81 ntBASIC7.32□□□□□ -1.24
RAPGEF3O95398 AL121652.1-201ENST00000608851 448 ntBASIC7.32□□□□□ -1.24
RAPGEF3O95398 AC004241.3-201ENST00000611728 517 ntBASIC7.32□□□□□ -1.24
RAPGEF3O95398 AC023043.4-201ENST00000612081 449 ntBASIC7.32□□□□□ -1.24
RAPGEF3O95398 AC015922.4-201ENST00000612568 690 ntBASIC7.32□□□□□ -1.24
RAPGEF3O95398 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.32□□□□□ -1.24
RAPGEF3O95398 AC084824.4-201ENST00000620106 731 ntBASIC7.32□□□□□ -1.24
RAPGEF3O95398 AC090617.9-201ENST00000623751 147 ntBASIC7.32□□□□□ -1.24
RAPGEF3O95398 AP000843.1-201ENST00000624880 701 ntBASIC7.32□□□□□ -1.24
RAPGEF3O95398 AC019080.5-201ENST00000624891 757 ntBASIC7.32□□□□□ -1.24
RAPGEF3O95398 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
RAPGEF3O95398 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RAPGEF3O95398 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RAPGEF3O95398 CA1-225ENST00000626824 2405 ntTSL 5 BASIC7.32□□□□□ -1.24
RAPGEF3O95398 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
RAPGEF3O95398 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RAPGEF3O95398 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.32□□□□□ -1.24
RAPGEF3O95398 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
RAPGEF3O95398 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
RAPGEF3O95398 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RAPGEF3O95398 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
RAPGEF3O95398 SAMMSON-210ENST00000641260 1308 ntBASIC7.31□□□□□ -1.24
RAPGEF3O95398 OFD1P9Y-201ENST00000417699 1491 ntBASIC7.31□□□□□ -1.24
RAPGEF3O95398 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RAPGEF3O95398 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RAPGEF3O95398 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC7.31□□□□□ -1.24
RAPGEF3O95398 AC093909.5-201ENST00000621839 1799 ntBASIC7.31□□□□□ -1.24
RAPGEF3O95398 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC7.31□□□□□ -1.24
RAPGEF3O95398 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
RAPGEF3O95398 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RAPGEF3O95398 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RAPGEF3O95398 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RAPGEF3O95398 SNORD65-201ENST00000391079 73 ntBASIC7.31□□□□□ -1.24
RAPGEF3O95398 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC7.31□□□□□ -1.24
RAPGEF3O95398 ATP5F1P2-201ENST00000398143 760 ntBASIC7.31□□□□□ -1.24
RAPGEF3O95398 AL390316.1-201ENST00000406279 553 ntBASIC7.31□□□□□ -1.24
RAPGEF3O95398 LSM5-206ENST00000409987 504 ntTSL 5 BASIC7.31□□□□□ -1.24
RAPGEF3O95398 AC009237.10-201ENST00000414112 510 ntBASIC7.31□□□□□ -1.24
RAPGEF3O95398 AC009237.5-201ENST00000414271 501 ntBASIC7.31□□□□□ -1.24
RAPGEF3O95398 RPS26P38-201ENST00000414476 348 ntBASIC7.31□□□□□ -1.24
RAPGEF3O95398 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC7.31□□□□□ -1.24
RAPGEF3O95398 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC7.31□□□□□ -1.24
RAPGEF3O95398 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC7.31□□□□□ -1.24
RAPGEF3O95398 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC7.31□□□□□ -1.24
RAPGEF3O95398 MTND1P26-201ENST00000440488 538 ntBASIC7.31□□□□□ -1.24
RAPGEF3O95398 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC7.31□□□□□ -1.24
RAPGEF3O95398 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC7.31□□□□□ -1.24
RAPGEF3O95398 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC7.31□□□□□ -1.24
RAPGEF3O95398 AL157884.3-201ENST00000448273 1184 ntBASIC7.31□□□□□ -1.24
RAPGEF3O95398 AL162591.2-201ENST00000449634 317 ntBASIC7.31□□□□□ -1.24
RAPGEF3O95398 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC7.31□□□□□ -1.24
RAPGEF3O95398 RPL5P12-201ENST00000477071 851 ntBASIC7.31□□□□□ -1.24
RAPGEF3O95398 CR383656.1-201ENST00000484916 377 ntBASIC7.31□□□□□ -1.24
RAPGEF3O95398 SNORA31.9-201ENST00000516429 84 ntBASIC7.31□□□□□ -1.24
RAPGEF3O95398 MRPL49P2-201ENST00000521066 465 ntBASIC7.31□□□□□ -1.24
RAPGEF3O95398 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC7.31□□□□□ -1.24
RAPGEF3O95398 AL049839.1-201ENST00000556151 657 ntBASIC7.31□□□□□ -1.24
RAPGEF3O95398 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC7.31□□□□□ -1.24
RAPGEF3O95398 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC7.31□□□□□ -1.24
RAPGEF3O95398 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC7.31□□□□□ -1.24
RAPGEF3O95398 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC7.31□□□□□ -1.24
RAPGEF3O95398 AP005229.2-201ENST00000609980 697 ntBASIC7.31□□□□□ -1.24
RAPGEF3O95398 AC012409.3-201ENST00000611343 981 ntBASIC7.31□□□□□ -1.24
RAPGEF3O95398 MIR6839-201ENST00000620425 113 ntBASIC7.31□□□□□ -1.24
RAPGEF3O95398 AC019206.1-201ENST00000621938 425 ntBASIC7.31□□□□□ -1.24
RAPGEF3O95398 AC067931.1-201ENST00000624190 671 ntBASIC7.31□□□□□ -1.24
RAPGEF3O95398 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC7.31□□□□□ -1.24
RAPGEF3O95398 AL442639.1-201ENST00000625030 1899 ntBASIC7.31□□□□□ -1.24
RAPGEF3O95398 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC7.31□□□□□ -1.24
RAPGEF3O95398 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
RAPGEF3O95398 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
RAPGEF3O95398 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
RAPGEF3O95398 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.31□□□□□ -1.24
RAPGEF3O95398 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC7.31□□□□□ -1.24
RAPGEF3O95398 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RAPGEF3O95398 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.3□□□□□ -1.24
RAPGEF3O95398 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC7.3□□□□□ -1.24
RAPGEF3O95398 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC7.3□□□□□ -1.24
RAPGEF3O95398 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RAPGEF3O95398 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RAPGEF3O95398 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RAPGEF3O95398 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RAPGEF3O95398 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RAPGEF3O95398 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
RAPGEF3O95398 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
RAPGEF3O95398 MIR208A-201ENST00000362287 71 ntBASIC7.3□□□□□ -1.24
RAPGEF3O95398 RNA5SP223-201ENST00000365174 120 ntBASIC7.3□□□□□ -1.24
RAPGEF3O95398 AC007618.1-201ENST00000366455 732 ntBASIC7.3□□□□□ -1.24
RAPGEF3O95398 RNU4-27P-201ENST00000410889 139 ntBASIC7.3□□□□□ -1.24
RAPGEF3O95398 AL158050.1-201ENST00000416077 457 ntBASIC7.3□□□□□ -1.24
RAPGEF3O95398 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC7.3□□□□□ -1.24
RAPGEF3O95398 RRM2P4-201ENST00000441721 562 ntBASIC7.3□□□□□ -1.24
RAPGEF3O95398 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC7.3□□□□□ -1.24
RAPGEF3O95398 RPL23AP23-201ENST00000452590 471 ntBASIC7.3□□□□□ -1.24
RAPGEF3O95398 RN7SL303P-201ENST00000469773 251 ntBASIC7.3□□□□□ -1.24
RAPGEF3O95398 AP002812.1-201ENST00000495378 474 ntBASIC7.3□□□□□ -1.24
RAPGEF3O95398 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC7.3□□□□□ -1.24
RAPGEF3O95398 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms