Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN4O14493 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.8□□□□□ -1.64
CLDN4O14493 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN4O14493 SNORA31.13-201ENST00000516624 135 ntBASIC4.8□□□□□ -1.64
CLDN4O14493 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.8□□□□□ -1.64
CLDN4O14493 CIR1P1-201ENST00000524055 1133 ntBASIC4.8□□□□□ -1.64
CLDN4O14493 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN4O14493 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.8□□□□□ -1.64
CLDN4O14493 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN4O14493 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN4O14493 CR383656.14-201ENST00000551951 406 ntBASIC4.8□□□□□ -1.64
CLDN4O14493 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN4O14493 NDUFB4P11-201ENST00000560510 395 ntBASIC4.8□□□□□ -1.64
CLDN4O14493 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.8□□□□□ -1.64
CLDN4O14493 NPM1P47-201ENST00000560843 856 ntBASIC4.8□□□□□ -1.64
CLDN4O14493 AC093510.2-201ENST00000562820 896 ntBASIC4.8□□□□□ -1.64
CLDN4O14493 AC106785.3-201ENST00000564064 847 ntBASIC4.8□□□□□ -1.64
CLDN4O14493 AC090079.2-201ENST00000575289 768 ntBASIC4.8□□□□□ -1.64
CLDN4O14493 MIR3936-201ENST00000584304 110 ntBASIC4.8□□□□□ -1.64
CLDN4O14493 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN4O14493 AF230666.2-201ENST00000602328 725 ntBASIC4.8□□□□□ -1.64
CLDN4O14493 AC005034.4-201ENST00000603612 899 ntBASIC4.8□□□□□ -1.64
CLDN4O14493 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN4O14493 Mico1.1-201ENST00000611698 204 ntBASIC4.8□□□□□ -1.64
CLDN4O14493 EIF3FP1-201ENST00000613970 806 ntBASIC4.8□□□□□ -1.64
CLDN4O14493 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN4O14493 AC090510.2-201ENST00000617465 629 ntBASIC4.8□□□□□ -1.64
CLDN4O14493 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN4O14493 AC007342.8-201ENST00000623278 678 ntBASIC4.8□□□□□ -1.64
CLDN4O14493 AP002799.1-201ENST00000623552 423 ntBASIC4.8□□□□□ -1.64
CLDN4O14493 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN4O14493 LINC01739-205ENST00000641890 573 ntBASIC4.8□□□□□ -1.64
CLDN4O14493 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN4O14493 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN4O14493 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN4O14493 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN4O14493 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLDN4O14493 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN4O14493 TRIM51GP-201ENST00000534741 1350 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CLDN4O14493 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLDN4O14493 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN4O14493 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CLDN4O14493 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN4O14493 SNURFL-201ENST00000309296 343 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 RNU6-609P-201ENST00000365459 107 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN4O14493 SNORA66-201ENST00000384792 133 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 AL645733.1-201ENST00000402250 217 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 ATP5F1P6-201ENST00000402768 767 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN4O14493 NPM1P40-201ENST00000412758 733 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 COX5BP7-201ENST00000414780 274 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 HYALP1-201ENST00000417674 1279 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN4O14493 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLDN4O14493 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN4O14493 AL035458.1-201ENST00000433096 585 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 VN1R54P-201ENST00000435210 1049 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 TMX2P1-201ENST00000436507 708 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 PSMD10P3-201ENST00000437000 448 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.79□□□□□ -1.64
CLDN4O14493 AC092647.3-201ENST00000443044 633 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 RPL34P26-201ENST00000445636 354 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN4O14493 AL354714.3-201ENST00000447284 493 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 AC243772.1-201ENST00000451620 410 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 RPS6P2-201ENST00000454208 705 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 TPT1P1-201ENST00000458495 518 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 RPL7P48-201ENST00000461513 746 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 RPS20P4-201ENST00000461659 355 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 RPL7AP6-201ENST00000477943 801 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.79□□□□□ -1.64
CLDN4O14493 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN4O14493 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN4O14493 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN4O14493 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN4O14493 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN4O14493 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN4O14493 UBTFL9-201ENST00000534504 1148 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN4O14493 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN4O14493 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN4O14493 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.79□□□□□ -1.64
CLDN4O14493 AL109741.3-201ENST00000561748 592 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 MIR4472-2-201ENST00000582069 67 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN4O14493 AC015911.5-201ENST00000587076 451 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN4O14493 AC079880.2-201ENST00000603790 1213 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 AC090525.3-201ENST00000605601 189 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 AC018695.5-201ENST00000605872 315 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN4O14493 AC010435.1-201ENST00000623353 1177 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 AC011815.3-201ENST00000624194 473 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 AC080188.3-201ENST00000624842 748 ntBASIC4.79□□□□□ -1.64
CLDN4O14493 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN4O14493 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN4O14493 AC131971.1-201ENST00000332881 1482 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms