Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
UPK1AO00322 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
UPK1AO00322 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.3□□□□□ -1.72
UPK1AO00322 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
UPK1AO00322 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
UPK1AO00322 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.29□□□□□ -1.72
UPK1AO00322 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
UPK1AO00322 AC000123.3-201ENST00000624029 4975 ntBASIC4.29□□□□□ -1.72
UPK1AO00322 ZNF137P-201ENST00000456718 1920 ntBASIC4.29□□□□□ -1.72
UPK1AO00322 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
UPK1AO00322 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
UPK1AO00322 RNA5SP22-201ENST00000365393 109 ntBASIC4.29□□□□□ -1.72
UPK1AO00322 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.29□□□□□ -1.72
UPK1AO00322 AC234781.4-201ENST00000419384 244 ntBASIC4.29□□□□□ -1.72
UPK1AO00322 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
UPK1AO00322 AL360081.1-201ENST00000428299 555 ntBASIC4.29□□□□□ -1.72
UPK1AO00322 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
UPK1AO00322 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.29□□□□□ -1.72
UPK1AO00322 IGLV2-34-201ENST00000490007 283 ntBASIC4.29□□□□□ -1.72
UPK1AO00322 MTND4LP2-201ENST00000502312 285 ntBASIC4.29□□□□□ -1.72
UPK1AO00322 KATNBL1P4-201ENST00000503545 918 ntBASIC4.29□□□□□ -1.72
UPK1AO00322 IGKV1-32-201ENST00000519290 311 ntBASIC4.29□□□□□ -1.72
UPK1AO00322 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
UPK1AO00322 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.29□□□□□ -1.72
UPK1AO00322 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.29□□□□□ -1.72
UPK1AO00322 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.29□□□□□ -1.72
UPK1AO00322 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.29□□□□□ -1.72
UPK1AO00322 AC008966.2-201ENST00000606157 453 ntBASIC4.29□□□□□ -1.72
UPK1AO00322 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
UPK1AO00322 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
UPK1AO00322 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.29□□□□□ -1.72
UPK1AO00322 CR382285.2-201ENST00000624662 1495 ntBASIC4.29□□□□□ -1.72
UPK1AO00322 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
UPK1AO00322 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
UPK1AO00322 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
UPK1AO00322 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
UPK1AO00322 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
UPK1AO00322 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
UPK1AO00322 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
UPK1AO00322 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
UPK1AO00322 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
UPK1AO00322 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
UPK1AO00322 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.28□□□□□ -1.72
UPK1AO00322 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
UPK1AO00322 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.28□□□□□ -1.72
UPK1AO00322 AC021146.4-201ENST00000309229 279 ntBASIC4.28□□□□□ -1.72
UPK1AO00322 AC067945.1-201ENST00000342609 618 ntBASIC4.28□□□□□ -1.72
UPK1AO00322 MIR93-201ENST00000385024 80 ntBASIC4.28□□□□□ -1.72
UPK1AO00322 MIR298-201ENST00000401212 88 ntBASIC4.28□□□□□ -1.72
UPK1AO00322 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.28□□□□□ -1.72
UPK1AO00322 GTF2IP2-201ENST00000424290 697 ntBASIC4.28□□□□□ -1.72
UPK1AO00322 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.28□□□□□ -1.72
UPK1AO00322 CDY14P-201ENST00000431260 1014 ntBASIC4.28□□□□□ -1.72
UPK1AO00322 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.28□□□□□ -1.72
UPK1AO00322 CDY12P-201ENST00000440679 1015 ntBASIC4.28□□□□□ -1.72
UPK1AO00322 CDY13P-201ENST00000445813 1015 ntBASIC4.28□□□□□ -1.72
UPK1AO00322 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.28□□□□□ -1.72
UPK1AO00322 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
UPK1AO00322 CDY23P-201ENST00000451661 1014 ntBASIC4.28□□□□□ -1.72
UPK1AO00322 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.28□□□□□ -1.72
UPK1AO00322 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
UPK1AO00322 RPS6P2-201ENST00000454208 705 ntBASIC4.28□□□□□ -1.72
UPK1AO00322 RN7SL610P-201ENST00000463845 291 ntBASIC4.28□□□□□ -1.72
UPK1AO00322 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.28□□□□□ -1.72
UPK1AO00322 RFPL4AP3-201ENST00000515267 345 ntBASIC4.28□□□□□ -1.72
UPK1AO00322 AC022882.1-201ENST00000532142 501 ntBASIC4.28□□□□□ -1.72
UPK1AO00322 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.28□□□□□ -1.72
UPK1AO00322 AC125612.1-201ENST00000547580 377 ntBASIC4.28□□□□□ -1.72
UPK1AO00322 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.28□□□□□ -1.72
UPK1AO00322 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.28□□□□□ -1.72
UPK1AO00322 MIR4480-201ENST00000582492 71 ntBASIC4.28□□□□□ -1.72
UPK1AO00322 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.28□□□□□ -1.72
UPK1AO00322 AC090181.2-201ENST00000602975 672 ntBASIC4.28□□□□□ -1.72
UPK1AO00322 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.28□□□□□ -1.72
UPK1AO00322 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.28□□□□□ -1.72
UPK1AO00322 AL133406.3-201ENST00000606817 541 ntBASIC4.28□□□□□ -1.72
UPK1AO00322 AL049539.1-201ENST00000611964 459 ntBASIC4.28□□□□□ -1.72
UPK1AO00322 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.28□□□□□ -1.72
UPK1AO00322 AC074140.1-201ENST00000621617 208 ntBASIC4.28□□□□□ -1.72
UPK1AO00322 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.28□□□□□ -1.72
UPK1AO00322 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
UPK1AO00322 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
UPK1AO00322 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
UPK1AO00322 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
UPK1AO00322 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
UPK1AO00322 AC108467.2-201ENST00000617640 1597 ntBASIC4.27□□□□□ -1.73
UPK1AO00322 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
UPK1AO00322 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.27□□□□□ -1.73
UPK1AO00322 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.27□□□□□ -1.73
UPK1AO00322 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
UPK1AO00322 KPNA2P2-201ENST00000419546 1489 ntBASIC4.27□□□□□ -1.73
UPK1AO00322 SNORA71.2-201ENST00000364941 134 ntBASIC4.27□□□□□ -1.73
UPK1AO00322 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.27□□□□□ -1.73
UPK1AO00322 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.27□□□□□ -1.73
UPK1AO00322 TMX2P1-201ENST00000436507 708 ntBASIC4.27□□□□□ -1.73
UPK1AO00322 AC011753.3-201ENST00000443436 406 ntBASIC4.27□□□□□ -1.73
UPK1AO00322 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.27□□□□□ -1.73
UPK1AO00322 RPL35AP28-201ENST00000459730 331 ntBASIC4.27□□□□□ -1.73
UPK1AO00322 AC079804.1-201ENST00000461922 436 ntBASIC4.27□□□□□ -1.73
UPK1AO00322 NIP7P2-201ENST00000485801 544 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms