Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
PDLIM1O00151 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PDLIM1O00151 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
PDLIM1O00151 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
PDLIM1O00151 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM1O00151 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM1O00151 ASNSP1-201ENST00000518311 1939 ntBASIC4.66□□□□□ -1.66
PDLIM1O00151 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM1O00151 AC009643.2-201ENST00000603543 1448 ntBASIC4.66□□□□□ -1.66
PDLIM1O00151 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM1O00151 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM1O00151 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM1O00151 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM1O00151 U3.3-201ENST00000362986 216 ntBASIC4.66□□□□□ -1.66
PDLIM1O00151 RNU1-83P-201ENST00000363426 164 ntBASIC4.66□□□□□ -1.66
PDLIM1O00151 MIR223-201ENST00000385204 110 ntBASIC4.66□□□□□ -1.66
PDLIM1O00151 AL136131.1-201ENST00000406079 803 ntBASIC4.66□□□□□ -1.66
PDLIM1O00151 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.66□□□□□ -1.66
PDLIM1O00151 GLUD1P9-201ENST00000420997 1173 ntBASIC4.66□□□□□ -1.66
PDLIM1O00151 MTND4LP13-201ENST00000425022 298 ntBASIC4.66□□□□□ -1.66
PDLIM1O00151 MTCO1P45-201ENST00000431457 267 ntBASIC4.66□□□□□ -1.66
PDLIM1O00151 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.66□□□□□ -1.66
PDLIM1O00151 NDUFA5P1-201ENST00000433858 341 ntBASIC4.66□□□□□ -1.66
PDLIM1O00151 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.66□□□□□ -1.66
PDLIM1O00151 AL450023.3-201ENST00000440592 271 ntBASIC4.66□□□□□ -1.66
PDLIM1O00151 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.66□□□□□ -1.66
PDLIM1O00151 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.66□□□□□ -1.66
PDLIM1O00151 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM1O00151 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.66□□□□□ -1.66
PDLIM1O00151 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.66□□□□□ -1.66
PDLIM1O00151 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.66□□□□□ -1.66
PDLIM1O00151 RNA5SP228-201ENST00000516232 133 ntBASIC4.66□□□□□ -1.66
PDLIM1O00151 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.66□□□□□ -1.66
PDLIM1O00151 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.66□□□□□ -1.66
PDLIM1O00151 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.66□□□□□ -1.66
PDLIM1O00151 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.66□□□□□ -1.66
PDLIM1O00151 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.66□□□□□ -1.66
PDLIM1O00151 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM1O00151 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.66□□□□□ -1.66
PDLIM1O00151 AC005229.3-201ENST00000603438 323 ntBASIC4.66□□□□□ -1.66
PDLIM1O00151 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.66□□□□□ -1.66
PDLIM1O00151 AC126915.2-201ENST00000610957 190 ntBASIC4.66□□□□□ -1.66
PDLIM1O00151 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM1O00151 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.66□□□□□ -1.66
PDLIM1O00151 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.66□□□□□ -1.66
PDLIM1O00151 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.66□□□□□ -1.66
PDLIM1O00151 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.66□□□□□ -1.66
PDLIM1O00151 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.66□□□□□ -1.66
PDLIM1O00151 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
PDLIM1O00151 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
PDLIM1O00151 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM1O00151 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM1O00151 PNPT1P2-201ENST00000456768 2050 ntBASIC4.66□□□□□ -1.66
PDLIM1O00151 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM1O00151 AL627171.1-201ENST00000618845 1308 ntBASIC4.66□□□□□ -1.66
PDLIM1O00151 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.66□□□□□ -1.66
PDLIM1O00151 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
PDLIM1O00151 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.65□□□□□ -1.66
PDLIM1O00151 AC011493.1-201ENST00000596753 1632 ntBASIC4.65□□□□□ -1.66
PDLIM1O00151 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.65□□□□□ -1.66
PDLIM1O00151 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PDLIM1O00151 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
PDLIM1O00151 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
PDLIM1O00151 LRRC37BP1-201ENST00000398851 714 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 NUDT19P3-201ENST00000404698 555 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 RGS17P1-201ENST00000423358 553 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.65□□□□□ -1.67
PDLIM1O00151 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.65□□□□□ -1.67
PDLIM1O00151 AL606490.8-201ENST00000441624 319 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 FAR2P1-206ENST00000449736 709 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 Z92846.1-201ENST00000456203 268 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 RPS17P2-201ENST00000461663 408 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 AC026348.1-201ENST00000462549 1053 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.65□□□□□ -1.67
PDLIM1O00151 AC074386.1-201ENST00000476560 767 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 STRADBP1-201ENST00000478954 1281 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 RN7SL809P-201ENST00000482040 297 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PDLIM1O00151 RPS4XP18-201ENST00000495480 763 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.65□□□□□ -1.67
PDLIM1O00151 AC093763.2-201ENST00000505334 1223 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 AC006499.3-201ENST00000506077 748 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 HIGD1AP14-201ENST00000507617 282 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
PDLIM1O00151 AC012400.1-201ENST00000518452 381 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 VTA1P2-201ENST00000520205 911 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.65□□□□□ -1.67
PDLIM1O00151 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.65□□□□□ -1.67
PDLIM1O00151 CYCSP28-201ENST00000534284 321 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 AC004825.1-201ENST00000555068 586 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.65□□□□□ -1.67
PDLIM1O00151 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.65□□□□□ -1.67
PDLIM1O00151 AC095055.1-201ENST00000603472 1113 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 AC073111.2-201ENST00000605657 1075 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.65□□□□□ -1.67
PDLIM1O00151 MIR6715B-201ENST00000637172 77 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 AC119674.1-220ENST00000641502 1048 ntBASIC4.65□□□□□ -1.67
PDLIM1O00151 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms