Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 AC132825.1-201ENST00000463573 2247 ntBASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 AL442639.1-201ENST00000625030 1899 ntBASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 RNU4-44P-201ENST00000363050 141 ntBASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 AL590762.2-201ENST00000395798 571 ntBASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 ARL4AP5-201ENST00000404372 599 ntBASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 RPS16P5-201ENST00000406501 404 ntBASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 BX510359.2-201ENST00000417920 305 ntBASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 AC004074.1-201ENST00000421810 1063 ntBASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 HMGB3P10-201ENST00000434734 572 ntBASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 HSPE1P22-201ENST00000456856 327 ntBASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 AC008897.1-201ENST00000494006 347 ntBASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 RN7SKP276-201ENST00000516242 268 ntBASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 TOMM20P2-201ENST00000540082 421 ntBASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 AC074050.1-201ENST00000563247 211 ntBASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 AP003499.2-201ENST00000624100 483 ntBASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CTNNA3Q9UI47 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 AL136164.3-201ENST00000624429 3978 ntBASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 RNU1-82P-201ENST00000390851 165 ntBASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 AL591848.1-201ENST00000413092 322 ntBASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 EIF4A1P1-201ENST00000420241 934 ntBASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 CYCSP11-201ENST00000436426 315 ntBASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 AC104651.2-201ENST00000447549 528 ntBASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 NPM1P39-201ENST00000449818 867 ntBASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 OR52Y1P-201ENST00000452418 828 ntBASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 AC073358.1-201ENST00000505671 684 ntBASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 HPRT1P1-201ENST00000509498 657 ntBASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 SOX5P1-201ENST00000524155 1127 ntBASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 AC234775.3-201ENST00000564612 656 ntBASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 UBE2FP2-201ENST00000566646 462 ntBASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 AC091042.1-201ENST00000579213 173 ntBASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 AC096553.1-201ENST00000605169 829 ntBASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 AL135786.2-201ENST00000608422 615 ntBASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 SNORD91B-202ENST00000608459 222 ntBASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 AC015804.1-201ENST00000622935 435 ntBASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CTNNA3Q9UI47 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.65□□□□□ -1.51
CTNNA3Q9UI47 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CTNNA3Q9UI47 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CTNNA3Q9UI47 BTBD10P1-201ENST00000549824 1352 ntBASIC5.65□□□□□ -1.51
CTNNA3Q9UI47 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CTNNA3Q9UI47 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CTNNA3Q9UI47 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CTNNA3Q9UI47 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CTNNA3Q9UI47 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CTNNA3Q9UI47 RNU6-398P-201ENST00000384143 109 ntBASIC5.64□□□□□ -1.51
CTNNA3Q9UI47 RSU1P3-201ENST00000412878 835 ntBASIC5.64□□□□□ -1.51
CTNNA3Q9UI47 AC119751.6-201ENST00000416712 186 ntBASIC5.64□□□□□ -1.51
CTNNA3Q9UI47 CYCSP10-201ENST00000417973 294 ntBASIC5.64□□□□□ -1.51
CTNNA3Q9UI47 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.64□□□□□ -1.51
CTNNA3Q9UI47 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.64□□□□□ -1.51
CTNNA3Q9UI47 RAB9AP5-201ENST00000437794 597 ntBASIC5.64□□□□□ -1.51
CTNNA3Q9UI47 AC005154.2-201ENST00000438110 379 ntBASIC5.64□□□□□ -1.51
CTNNA3Q9UI47 AC016831.4-201ENST00000438302 307 ntBASIC5.64□□□□□ -1.51
CTNNA3Q9UI47 RAB9AP2-201ENST00000443911 597 ntBASIC5.64□□□□□ -1.51
CTNNA3Q9UI47 H2AFZP5-201ENST00000446960 382 ntBASIC5.64□□□□□ -1.51
CTNNA3Q9UI47 AL513533.1-201ENST00000453728 415 ntBASIC5.64□□□□□ -1.51
CTNNA3Q9UI47 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms