Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 AL359219.2-201ENST00000555184 348 ntBASIC5.69□□□□□ -1.5
SCN11AQ9UI33 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 AC025884.1-201ENST00000556034 378 ntBASIC5.69□□□□□ -1.5
SCN11AQ9UI33 AP005901.4-201ENST00000577336 569 ntBASIC5.69□□□□□ -1.5
SCN11AQ9UI33 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.69□□□□□ -1.5
SCN11AQ9UI33 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 AL445363.3-201ENST00000623080 671 ntBASIC5.69□□□□□ -1.5
SCN11AQ9UI33 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 AP005435.3-201ENST00000531260 3198 ntBASIC5.69□□□□□ -1.5
SCN11AQ9UI33 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCN11AQ9UI33 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCN11AQ9UI33 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SCN11AQ9UI33 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SCN11AQ9UI33 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCN11AQ9UI33 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SCN11AQ9UI33 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SCN11AQ9UI33 UBE2V1P3-201ENST00000439651 417 ntBASIC5.68□□□□□ -1.5
SCN11AQ9UI33 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.68□□□□□ -1.5
SCN11AQ9UI33 NDUFB4P12-201ENST00000513465 390 ntBASIC5.68□□□□□ -1.5
SCN11AQ9UI33 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.68□□□□□ -1.5
SCN11AQ9UI33 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.68□□□□□ -1.5
SCN11AQ9UI33 AP003730.1-201ENST00000524605 285 ntBASIC5.68□□□□□ -1.5
SCN11AQ9UI33 AC053481.3-201ENST00000577881 843 ntBASIC5.68□□□□□ -1.5
SCN11AQ9UI33 MIR4286-201ENST00000580651 93 ntBASIC5.68□□□□□ -1.5
SCN11AQ9UI33 AC006130.2-201ENST00000586202 326 ntBASIC5.68□□□□□ -1.5
SCN11AQ9UI33 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCN11AQ9UI33 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SCN11AQ9UI33 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SCN11AQ9UI33 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.68□□□□□ -1.5
SCN11AQ9UI33 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SCN11AQ9UI33 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCN11AQ9UI33 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.68□□□□□ -1.5
SCN11AQ9UI33 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SCN11AQ9UI33 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SCN11AQ9UI33 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SCN11AQ9UI33 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.68□□□□□ -1.5
SCN11AQ9UI33 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCN11AQ9UI33 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCN11AQ9UI33 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SCN11AQ9UI33 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN11AQ9UI33 SNORA11.2-201ENST00000408318 127 ntBASIC5.67□□□□□ -1.5
SCN11AQ9UI33 ARAFP1-201ENST00000422172 605 ntBASIC5.67□□□□□ -1.5
SCN11AQ9UI33 RPL21P89-201ENST00000444021 467 ntBASIC5.67□□□□□ -1.5
SCN11AQ9UI33 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.67□□□□□ -1.5
SCN11AQ9UI33 MRPL48P1-201ENST00000445390 636 ntBASIC5.67□□□□□ -1.5
SCN11AQ9UI33 RNA5SP246-201ENST00000458909 119 ntBASIC5.67□□□□□ -1.5
SCN11AQ9UI33 SAP18P1-201ENST00000512058 390 ntBASIC5.67□□□□□ -1.5
SCN11AQ9UI33 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.67□□□□□ -1.5
SCN11AQ9UI33 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.67□□□□□ -1.5
SCN11AQ9UI33 AC091178.1-203ENST00000584586 279 ntBASIC5.67□□□□□ -1.5
SCN11AQ9UI33 AC067931.1-201ENST00000624190 671 ntBASIC5.67□□□□□ -1.5
SCN11AQ9UI33 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.67□□□□□ -1.5
SCN11AQ9UI33 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN11AQ9UI33 TET1P1-201ENST00000426627 2301 ntBASIC5.67□□□□□ -1.5
SCN11AQ9UI33 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN11AQ9UI33 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SCN11AQ9UI33 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SCN11AQ9UI33 RNU1-14P-201ENST00000362759 152 ntBASIC5.67□□□□□ -1.5
SCN11AQ9UI33 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.67□□□□□ -1.5
SCN11AQ9UI33 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.67□□□□□ -1.5
SCN11AQ9UI33 RPS27AP13-201ENST00000498403 237 ntBASIC5.67□□□□□ -1.5
SCN11AQ9UI33 RNA5SP49-201ENST00000516450 115 ntBASIC5.67□□□□□ -1.5
SCN11AQ9UI33 RNU1-45P-201ENST00000517191 141 ntBASIC5.67□□□□□ -1.5
SCN11AQ9UI33 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.67□□□□□ -1.5
SCN11AQ9UI33 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.67□□□□□ -1.5
SCN11AQ9UI33 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.67□□□□□ -1.5
SCN11AQ9UI33 AC234782.5-201ENST00000617723 324 ntBASIC5.67□□□□□ -1.5
SCN11AQ9UI33 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
SCN11AQ9UI33 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SCN11AQ9UI33 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
SCN11AQ9UI33 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SCN11AQ9UI33 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SCN11AQ9UI33 AL603750.1-201ENST00000624216 1717 ntBASIC5.66□□□□□ -1.5
SCN11AQ9UI33 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SCN11AQ9UI33 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN11AQ9UI33 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SCN11AQ9UI33 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.66□□□□□ -1.5
SCN11AQ9UI33 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN11AQ9UI33 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SCN11AQ9UI33 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SCN11AQ9UI33 RN7SKP224-201ENST00000364140 325 ntBASIC5.66□□□□□ -1.5
SCN11AQ9UI33 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN11AQ9UI33 AL358176.3-201ENST00000420757 454 ntBASIC5.66□□□□□ -1.5
SCN11AQ9UI33 RPL23AP38-201ENST00000423801 469 ntBASIC5.66□□□□□ -1.5
SCN11AQ9UI33 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.66□□□□□ -1.5
SCN11AQ9UI33 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.66□□□□□ -1.5
SCN11AQ9UI33 RN7SL542P-201ENST00000467147 294 ntBASIC5.66□□□□□ -1.5
SCN11AQ9UI33 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.66□□□□□ -1.5
SCN11AQ9UI33 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.66□□□□□ -1.5
SCN11AQ9UI33 AC005520.3-201ENST00000602874 370 ntBASIC5.66□□□□□ -1.5
SCN11AQ9UI33 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN11AQ9UI33 ZYXP1-201ENST00000617638 118 ntBASIC5.66□□□□□ -1.5
SCN11AQ9UI33 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN11AQ9UI33 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms