Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 BTF3P10-201ENST00000433415 495 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 CYCSP11-201ENST00000436426 315 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 AL118496.2-201ENST00000448300 230 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 AC108463.1-201ENST00000450258 347 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 RBMY2TP-201ENST00000451162 947 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 RN7SL254P-201ENST00000460609 284 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 TRBV8-2-201ENST00000475637 270 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CNTN3Q9P232 NPM1P27-201ENST00000502784 830 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 DUTP7-201ENST00000507982 486 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 PAICSP4-201ENST00000517543 1253 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CNTN3Q9P232 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 AC091489.2-201ENST00000566263 604 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 AC067852.5-201ENST00000589299 310 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CNTN3Q9P232 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CNTN3Q9P232 AL596327.1-201ENST00000603629 213 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 BNIP3P9-201ENST00000603714 553 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 AC233280.2-201ENST00000603917 1070 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 AC098614.4-201ENST00000607601 462 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 AC005899.7-201ENST00000618199 588 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 AC079228.1-201ENST00000624774 1049 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CNTN3Q9P232 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CNTN3Q9P232 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CNTN3Q9P232 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CNTN3Q9P232 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.87□□□□□ -1.31
CNTN3Q9P232 AP002370.1-201ENST00000528055 1602 ntBASIC6.87□□□□□ -1.31
CNTN3Q9P232 AC017104.4-201ENST00000636283 1592 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CNTN3Q9P232 CDR1-202ENST00000625883 1485 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CNTN3Q9P232 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CNTN3Q9P232 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
CNTN3Q9P232 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CNTN3Q9P232 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CNTN3Q9P232 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CNTN3Q9P232 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 RNU5F-6P-201ENST00000362979 116 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 RNA5SP350-201ENST00000363298 111 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 RNA5SP333-201ENST00000363466 118 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 RNA5SP334-201ENST00000364825 118 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 RNU6-532P-201ENST00000384318 107 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 RNU6-297P-201ENST00000384636 107 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 MIR621-201ENST00000384919 96 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 RNU6-876P-201ENST00000391295 104 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 AC104297.1-201ENST00000393779 870 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 CCNG1P1-201ENST00000406783 885 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 RPL23AP47-201ENST00000408017 460 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 U3.43-201ENST00000410734 213 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 AL450992.3-201ENST00000413192 568 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 AL645936.1-201ENST00000441979 518 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 AL161722.1-201ENST00000446972 1032 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 AC108078.3-201ENST00000502633 489 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 RNU6-875P-201ENST00000516488 106 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 RNA5SP135-201ENST00000517019 125 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CNTN3Q9P232 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 AL845552.1-201ENST00000556820 323 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 AC136618.2-201ENST00000575091 400 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 MIR548Y-201ENST00000582739 110 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 MIR4701-201ENST00000583094 63 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 AL008723.3-201ENST00000608926 449 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 AC103710.1-201ENST00000610003 901 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 AL080312.2-201ENST00000613001 630 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CNTN3Q9P232 AC027807.2-201ENST00000616099 408 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms