Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 MAPK10-303ENST00000641324 3959 ntBASIC4.56□□□□□ -1.68
TREX1Q9NSU2 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 CPHL1P-201ENST00000461341 3407 ntBASIC4.56□□□□□ -1.68
TREX1Q9NSU2 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 NCSTNP1-201ENST00000406229 144 ntBASIC4.56□□□□□ -1.68
TREX1Q9NSU2 FCF1P5-201ENST00000406490 482 ntBASIC4.56□□□□□ -1.68
TREX1Q9NSU2 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 AC009302.1-201ENST00000417147 390 ntBASIC4.56□□□□□ -1.68
TREX1Q9NSU2 AC073136.2-201ENST00000417282 849 ntBASIC4.56□□□□□ -1.68
TREX1Q9NSU2 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 AL590762.4-201ENST00000425885 253 ntBASIC4.56□□□□□ -1.68
TREX1Q9NSU2 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 RN7SL346P-201ENST00000491561 294 ntBASIC4.56□□□□□ -1.68
TREX1Q9NSU2 AC105233.1-201ENST00000498840 781 ntBASIC4.56□□□□□ -1.68
TREX1Q9NSU2 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 AC090151.1-201ENST00000520784 730 ntBASIC4.56□□□□□ -1.68
TREX1Q9NSU2 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 GSTP1P1-201ENST00000548078 319 ntBASIC4.56□□□□□ -1.68
TREX1Q9NSU2 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 RN7SL690P-201ENST00000582087 240 ntBASIC4.56□□□□□ -1.68
TREX1Q9NSU2 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 BPIFA4P-203ENST00000603168 689 ntBASIC4.56□□□□□ -1.68
TREX1Q9NSU2 AL133406.3-201ENST00000606817 541 ntBASIC4.56□□□□□ -1.68
TREX1Q9NSU2 AL135786.2-201ENST00000608422 615 ntBASIC4.56□□□□□ -1.68
TREX1Q9NSU2 AL353726.1-201ENST00000614041 1000 ntBASIC4.56□□□□□ -1.68
TREX1Q9NSU2 uc_338.18-201ENST00000615451 175 ntBASIC4.56□□□□□ -1.68
TREX1Q9NSU2 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 AP000542.2-201ENST00000623199 6179 ntBASIC4.56□□□□□ -1.68
TREX1Q9NSU2 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 LINC00622-201ENST00000562811 1570 ntBASIC4.56□□□□□ -1.68
TREX1Q9NSU2 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TREX1Q9NSU2 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 OR14L1P-202ENST00000641545 3009 ntBASIC4.55□□□□□ -1.68
TREX1Q9NSU2 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 AC000123.3-201ENST00000624029 4975 ntBASIC4.55□□□□□ -1.68
TREX1Q9NSU2 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 SDHCP2-201ENST00000398565 501 ntBASIC4.55□□□□□ -1.68
TREX1Q9NSU2 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 AC244033.1-201ENST00000426826 870 ntBASIC4.55□□□□□ -1.68
TREX1Q9NSU2 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 AC022431.1-201ENST00000450941 438 ntBASIC4.55□□□□□ -1.68
TREX1Q9NSU2 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 RPL10P17-201ENST00000453852 316 ntBASIC4.55□□□□□ -1.68
TREX1Q9NSU2 RN7SL826P-201ENST00000479724 288 ntBASIC4.55□□□□□ -1.68
TREX1Q9NSU2 RPL32P9-201ENST00000487963 407 ntBASIC4.55□□□□□ -1.68
TREX1Q9NSU2 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 AF186190.1-201ENST00000517470 480 ntBASIC4.55□□□□□ -1.68
TREX1Q9NSU2 OR5D15P-201ENST00000531671 942 ntBASIC4.55□□□□□ -1.68
TREX1Q9NSU2 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 SLC25A36P1-201ENST00000590111 465 ntBASIC4.55□□□□□ -1.68
TREX1Q9NSU2 AC133552.5-201ENST00000604266 540 ntBASIC4.55□□□□□ -1.68
TREX1Q9NSU2 AC010201.1-201ENST00000605051 540 ntBASIC4.55□□□□□ -1.68
TREX1Q9NSU2 AC131238.1-201ENST00000617135 328 ntBASIC4.55□□□□□ -1.68
TREX1Q9NSU2 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 HCFC2P1-201ENST00000392864 1592 ntBASIC4.55□□□□□ -1.68
TREX1Q9NSU2 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 MAPK10-304ENST00000641341 3984 ntBASIC4.55□□□□□ -1.68
TREX1Q9NSU2 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TREX1Q9NSU2 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TREX1Q9NSU2 AC108467.2-201ENST00000617640 1597 ntBASIC4.54□□□□□ -1.68
TREX1Q9NSU2 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms