Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC098799.3-201ENST00000506095 438 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 AP001284.1-201ENST00000528393 2118 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 CYCSP28-201ENST00000534284 321 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 EDDM3DP-201ENST00000554692 434 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 ATP5J2P6-201ENST00000565203 266 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 AL583832.1-201ENST00000603227 784 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 BNIP3P19-201ENST00000605397 577 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 AP002360.3-201ENST00000607673 710 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 U3.53-201ENST00000628922 216 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 AL355480.1-201ENST00000629041 99 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 AC063952.1-203ENST00000634410 658 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 Z95331.1-201ENST00000623075 23112 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.94□□□□□ -1.62
SIX2Q9NPC8 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.94□□□□□ -1.62
SIX2Q9NPC8 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.94□□□□□ -1.62
SIX2Q9NPC8 AC008079.2-201ENST00000623543 20396 ntBASIC4.94□□□□□ -1.62
SIX2Q9NPC8 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SIX2Q9NPC8 AC026523.2-201ENST00000625039 7739 ntBASIC4.94□□□□□ -1.62
SIX2Q9NPC8 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SIX2Q9NPC8 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SIX2Q9NPC8 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.94□□□□□ -1.62
SIX2Q9NPC8 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SIX2Q9NPC8 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SIX2Q9NPC8 RNA5SP87-201ENST00000384155 118 ntBASIC4.94□□□□□ -1.62
SIX2Q9NPC8 MIR659-201ENST00000384963 97 ntBASIC4.94□□□□□ -1.62
SIX2Q9NPC8 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.94□□□□□ -1.62
SIX2Q9NPC8 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.94□□□□□ -1.62
SIX2Q9NPC8 NPM1P26-201ENST00000426339 738 ntBASIC4.94□□□□□ -1.62
SIX2Q9NPC8 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.94□□□□□ -1.62
SIX2Q9NPC8 AC073508.1-201ENST00000428866 656 ntBASIC4.94□□□□□ -1.62
SIX2Q9NPC8 AC023141.6-201ENST00000429418 337 ntBASIC4.94□□□□□ -1.62
SIX2Q9NPC8 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.94□□□□□ -1.62
SIX2Q9NPC8 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SIX2Q9NPC8 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.94□□□□□ -1.62
SIX2Q9NPC8 AC091685.2-201ENST00000454924 864 ntBASIC4.94□□□□□ -1.62
SIX2Q9NPC8 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.94□□□□□ -1.62
SIX2Q9NPC8 AC135999.1-201ENST00000478962 479 ntBASIC4.94□□□□□ -1.62
SIX2Q9NPC8 MTND4LP2-201ENST00000502312 285 ntBASIC4.94□□□□□ -1.62
SIX2Q9NPC8 AC108157.1-201ENST00000510511 539 ntBASIC4.94□□□□□ -1.62
SIX2Q9NPC8 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.94□□□□□ -1.62
SIX2Q9NPC8 RNU6-491P-201ENST00000516099 110 ntBASIC4.94□□□□□ -1.62
SIX2Q9NPC8 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.94□□□□□ -1.62
SIX2Q9NPC8 AP001922.4-201ENST00000526967 290 ntBASIC4.94□□□□□ -1.62
SIX2Q9NPC8 RPL21P7-201ENST00000557463 483 ntBASIC4.94□□□□□ -1.62
SIX2Q9NPC8 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.94□□□□□ -1.62
SIX2Q9NPC8 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.94□□□□□ -1.62
SIX2Q9NPC8 MIR4436B2-201ENST00000581415 91 ntBASIC4.94□□□□□ -1.62
SIX2Q9NPC8 MIR4436B1-201ENST00000583272 91 ntBASIC4.94□□□□□ -1.62
SIX2Q9NPC8 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SIX2Q9NPC8 LSM1P2-201ENST00000604911 322 ntBASIC4.94□□□□□ -1.62
SIX2Q9NPC8 uc_338.18-201ENST00000615451 175 ntBASIC4.94□□□□□ -1.62
SIX2Q9NPC8 AL031595.2-201ENST00000624215 19071 ntBASIC4.94□□□□□ -1.62
SIX2Q9NPC8 AC131971.1-201ENST00000332881 1482 ntBASIC4.94□□□□□ -1.62
SIX2Q9NPC8 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.94□□□□□ -1.62
SIX2Q9NPC8 AC125257.1-201ENST00000560400 2930 ntBASIC4.93□□□□□ -1.62
SIX2Q9NPC8 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 SDAD1P1-202ENST00000524156 2051 ntBASIC4.93□□□□□ -1.62
SIX2Q9NPC8 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 PCAT14-202ENST00000627127 3935 ntBASIC4.93□□□□□ -1.62
SIX2Q9NPC8 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 GAPDHP15-201ENST00000398586 975 ntBASIC4.93□□□□□ -1.62
SIX2Q9NPC8 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 RN7SKP97-201ENST00000410966 333 ntBASIC4.93□□□□□ -1.62
SIX2Q9NPC8 AC098592.2-201ENST00000413158 265 ntBASIC4.93□□□□□ -1.62
SIX2Q9NPC8 SEPT7P8-201ENST00000413308 775 ntBASIC4.93□□□□□ -1.62
SIX2Q9NPC8 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 TRIM60P17-201ENST00000415181 719 ntBASIC4.93□□□□□ -1.62
SIX2Q9NPC8 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 AC004448.2-201ENST00000422360 586 ntBASIC4.93□□□□□ -1.62
SIX2Q9NPC8 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 AL590762.4-201ENST00000425885 253 ntBASIC4.93□□□□□ -1.62
SIX2Q9NPC8 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 AC006484.1-201ENST00000435086 1884 ntBASIC4.93□□□□□ -1.62
SIX2Q9NPC8 GXYLT1P1-201ENST00000446657 490 ntBASIC4.93□□□□□ -1.62
SIX2Q9NPC8 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 EIF2S2P4-201ENST00000461070 984 ntBASIC4.93□□□□□ -1.62
SIX2Q9NPC8 AC104763.1-201ENST00000475274 360 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 333.4 ms