Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 MIR7844-201ENST00000616161 122 ntBASIC5.48□□□□□ -1.53
SEC61A2Q9H9S3 U4.5-201ENST00000617137 123 ntBASIC5.48□□□□□ -1.53
SEC61A2Q9H9S3 AL356321.1-201ENST00000621360 228 ntBASIC5.48□□□□□ -1.53
SEC61A2Q9H9S3 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
SEC61A2Q9H9S3 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
SEC61A2Q9H9S3 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SEC61A2Q9H9S3 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.48□□□□□ -1.53
SEC61A2Q9H9S3 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SEC61A2Q9H9S3 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
SEC61A2Q9H9S3 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SEC61A2Q9H9S3 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.48□□□□□ -1.53
SEC61A2Q9H9S3 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SEC61A2Q9H9S3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
SEC61A2Q9H9S3 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SEC61A2Q9H9S3 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
SEC61A2Q9H9S3 HSPD1P9-201ENST00000420325 1636 ntBASIC5.48□□□□□ -1.53
SEC61A2Q9H9S3 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SEC61A2Q9H9S3 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.48□□□□□ -1.53
SEC61A2Q9H9S3 EIF3EP1-201ENST00000433978 1316 ntBASIC5.48□□□□□ -1.53
SEC61A2Q9H9S3 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AC130360.2-201ENST00000533477 1556 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 RNU6-543P-201ENST00000362576 108 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 RNA5SP110-201ENST00000362638 115 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 SNORA4.1-201ENST00000364263 144 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 Y_RNA.408-201ENST00000383987 102 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 RNU6-244P-201ENST00000391028 104 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 SNORD115-47-201ENST00000391226 86 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AC099782.1-201ENST00000425889 474 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 DSTNP5-201ENST00000427921 523 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 PA2G4P6-201ENST00000438325 1197 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 ARAFP2-201ENST00000440565 559 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 RPSAP40-201ENST00000442343 891 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 GAPDHP23-201ENST00000444823 993 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 RANP1-206ENST00000455094 651 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 RN7SL352P-201ENST00000466002 277 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 HMGB1P36-201ENST00000487709 576 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 RN7SL649P-201ENST00000496974 275 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 RNU6-1334P-201ENST00000516032 105 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 NPIPB14P-203ENST00000532298 987 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 GTF2IP22-201ENST00000554443 182 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AC090651.1-201ENST00000567865 634 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 SMIM12P1-201ENST00000603004 274 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AP001330.5-201ENST00000607176 411 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AC063943.3-201ENST00000615562 356 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AC007742.2-201ENST00000618226 398 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AC009120.7-201ENST00000623452 780 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AC073488.6-201ENST00000632293 754 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AC024587.1-201ENST00000505925 2157 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AC139426.3-201ENST00000605648 2059 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 AL121768.1-201ENST00000613917 2544 ntBASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms