Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 RNU6-225P-201ENST00000384613 103 ntBASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 AL590762.2-201ENST00000395798 571 ntBASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 DPPA2P3-201ENST00000411853 655 ntBASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 AC007559.1-201ENST00000428736 355 ntBASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 MTCYBP29-201ENST00000436327 1006 ntBASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 ELOCP10-201ENST00000440624 327 ntBASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 AC026348.1-201ENST00000462549 1053 ntBASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 AC025164.1-201ENST00000496249 478 ntBASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 EDDM3DP-201ENST00000554692 434 ntBASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 OR7E18P-201ENST00000592589 702 ntBASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 ELOCP34-201ENST00000604436 327 ntBASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 AC016769.4-201ENST00000616893 535 ntBASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 AC092079.1-201ENST00000558620 1985 ntBASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 AC104118.1-201ENST00000607625 1589 ntBASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 MAPK10-263ENST00000641052 4307 ntBASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 MAPK10-286ENST00000641208 8747 ntBASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LRRC40Q9H9A6 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 RNU6-891P-201ENST00000384280 111 ntBASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 AJ239321.1-201ENST00000424255 564 ntBASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 MTCO1P45-201ENST00000431457 267 ntBASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 OR52J1P-201ENST00000450596 932 ntBASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 AC010733.1-201ENST00000451515 401 ntBASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 APOOP2-201ENST00000461561 539 ntBASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 AC104629.2-201ENST00000468627 598 ntBASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 RN7SL177P-201ENST00000476596 299 ntBASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 RPS4XP14-201ENST00000493072 781 ntBASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 AC091868.1-201ENST00000508746 304 ntBASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 SCARNA21.2-201ENST00000516600 166 ntBASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 OR5AZ1P-201ENST00000527448 943 ntBASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 AC021006.3-201ENST00000530771 192 ntBASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 AC123786.2-201ENST00000603459 275 ntBASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 COX6CP4-201ENST00000605798 228 ntBASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 AP000894.4-201ENST00000610185 483 ntBASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 SDR42E1P1-201ENST00000611327 477 ntBASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 AC107905.1-201ENST00000616204 426 ntBASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 AC068870.2-201ENST00000620635 389 ntBASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC40Q9H9A6 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
LRRC40Q9H9A6 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms