Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 AL121932.1-201ENST00000605542 214 ntBASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 AL109620.1-201ENST00000618738 1197 ntBASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 RNU6-368P-201ENST00000620928 107 ntBASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 RNU6-538P-201ENST00000622329 107 ntBASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 AC011815.3-201ENST00000624194 473 ntBASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC28BQ9BUN5 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 AC097504.1-201ENST00000515103 2415 ntBASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 RNA5SP39-201ENST00000411245 120 ntBASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 AF186996.5-201ENST00000418098 904 ntBASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 IPMKP1-201ENST00000425988 855 ntBASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 RPL7P33-201ENST00000444159 742 ntBASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 RN7SL222P-201ENST00000476452 299 ntBASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 RPL7P39-201ENST00000481157 744 ntBASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 AC016687.1-201ENST00000482574 353 ntBASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 RN7SL649P-201ENST00000496974 275 ntBASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 AC012414.2-201ENST00000559474 187 ntBASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 AC093249.4-201ENST00000564755 259 ntBASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 RPL21P136-201ENST00000605378 396 ntBASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 AC084036.1-201ENST00000609190 508 ntBASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 AC023509.5-201ENST00000617434 807 ntBASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 AC244100.4-201ENST00000617747 388 ntBASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 AL162233.1-201ENST00000620014 944 ntBASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 AC018529.3-201ENST00000624212 2254 ntBASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC28BQ9BUN5 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 RNU6-697P-201ENST00000363348 107 ntBASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 RNU6-618P-201ENST00000363518 112 ntBASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 RNU6-1331P-201ENST00000363658 106 ntBASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 Z97832.1-201ENST00000402490 328 ntBASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 AL512430.2-201ENST00000406786 339 ntBASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 GAPDHP49-201ENST00000421421 961 ntBASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 PRPF38AP2-201ENST00000438179 851 ntBASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 ZFRP1-201ENST00000457579 2970 ntBASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 UBA52P3-201ENST00000491303 382 ntBASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 AC008694.2-201ENST00000517591 306 ntBASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 AC090151.1-201ENST00000520784 730 ntBASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 AC005000.1-201ENST00000536192 288 ntBASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 AC011447.4-201ENST00000587562 111 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms