Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RPL5P7-201ENST00000444235 813 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 AC239367.2-201ENST00000447309 705 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 COX4I1P2-201ENST00000447446 547 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 AL591363.1-201ENST00000450091 483 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 HMGB1P7-201ENST00000450921 612 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 RPL26P30-201ENST00000453533 435 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 MTCO3P11-201ENST00000455103 774 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 AL163540.1-201ENST00000485382 386 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 NIFKP7-201ENST00000503365 834 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 AL390198.2-201ENST00000510553 222 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 AC079395.1-201ENST00000510981 262 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 SAP18P1-201ENST00000512058 390 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 MTND6P2-201ENST00000512226 524 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 AC109445.1-201ENST00000512356 383 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 Y_RNA.720-201ENST00000517166 92 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 AP005902.1-201ENST00000521358 186 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 AC243972.3-201ENST00000539655 198 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 AC092718.4-201ENST00000566639 716 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 AC025678.1-201ENST00000567861 338 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 AC245052.7-201ENST00000601161 359 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 RMST_7.1-201ENST00000621935 268 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 NXF4-202ENST00000416098 1465 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 AL359195.2-201ENST00000623657 4412 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 AC009831.5-201ENST00000624000 3189 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 RPL11P4-201ENST00000332269 436 ntBASIC7.72□□□□□ -1.17
TRIM47Q96LD4 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 Y_RNA.307-201ENST00000365022 117 ntBASIC7.72□□□□□ -1.17
TRIM47Q96LD4 RN7SKP47-201ENST00000365347 328 ntBASIC7.72□□□□□ -1.17
TRIM47Q96LD4 SNORA19-201ENST00000384737 128 ntBASIC7.72□□□□□ -1.17
TRIM47Q96LD4 SNORA40.3-201ENST00000390964 122 ntBASIC7.72□□□□□ -1.17
TRIM47Q96LD4 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 RNU4-55P-201ENST00000410731 137 ntBASIC7.72□□□□□ -1.17
TRIM47Q96LD4 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 MTCYBP9-201ENST00000431021 303 ntBASIC7.72□□□□□ -1.17
TRIM47Q96LD4 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 Y_RNA.632-201ENST00000459189 102 ntBASIC7.72□□□□□ -1.17
TRIM47Q96LD4 RPL7P19-201ENST00000469948 618 ntBASIC7.72□□□□□ -1.17
TRIM47Q96LD4 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 AC010655.3-201ENST00000478818 450 ntBASIC7.72□□□□□ -1.17
TRIM47Q96LD4 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 AC090424.1-201ENST00000535243 736 ntBASIC7.72□□□□□ -1.17
TRIM47Q96LD4 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 FXNP1-201ENST00000555153 337 ntBASIC7.72□□□□□ -1.17
TRIM47Q96LD4 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 MIR4443-201ENST00000585052 53 ntBASIC7.72□□□□□ -1.17
TRIM47Q96LD4 XIAPP1-201ENST00000603162 600 ntBASIC7.72□□□□□ -1.17
TRIM47Q96LD4 MEMO1P5-201ENST00000604810 406 ntBASIC7.72□□□□□ -1.17
TRIM47Q96LD4 AC004853.1-201ENST00000604902 698 ntBASIC7.72□□□□□ -1.17
TRIM47Q96LD4 AL136363.1-201ENST00000605349 337 ntBASIC7.72□□□□□ -1.17
TRIM47Q96LD4 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 MLECP1-201ENST00000615893 709 ntBASIC7.72□□□□□ -1.17
TRIM47Q96LD4 MIR6886-201ENST00000619864 61 ntBASIC7.72□□□□□ -1.17
TRIM47Q96LD4 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.72□□□□□ -1.17
TRIM47Q96LD4 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms