Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MRPS36P3-201ENST00000519284 130 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 OR5AK3P-201ENST00000527486 1297 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 AL109741.3-201ENST00000561748 592 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 AL132657.2-201ENST00000564417 358 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 AC015720.2-201ENST00000567709 334 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 AC005412.1-201ENST00000580812 1049 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 MIR3176-201ENST00000582210 90 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 AC124856.1-201ENST00000600819 896 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 AC022467.1-201ENST00000614738 749 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 AC231759.1-201ENST00000616455 597 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS50Q96JG6 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS50Q96JG6 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS50Q96JG6 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS50Q96JG6 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS50Q96JG6 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 YES1P1-201ENST00000418510 1628 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 SMG1P4-204ENST00000523028 4131 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS50Q96JG6 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS50Q96JG6 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS50Q96JG6 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS50Q96JG6 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS50Q96JG6 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 RN7SKP160-201ENST00000363804 340 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 RNA5SP27-201ENST00000363839 119 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 RNU4-40P-201ENST00000364351 143 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 RNU4-28P-201ENST00000364739 141 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 Y_RNA.472-201ENST00000384322 102 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 HMGB3P18-201ENST00000406327 590 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 MTND4P3-201ENST00000417829 541 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 AC246680.2-201ENST00000422106 389 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 RPL34P6-201ENST00000432390 345 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 GAPDHP48-201ENST00000436626 961 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 PTGES3P1-201ENST00000439531 483 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 AC244505.3-201ENST00000454598 187 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 SNORD125-201ENST00000459538 96 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS50Q96JG6 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 RPL5P23-201ENST00000496040 868 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 RFPL4AP5-201ENST00000514977 504 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 RNA5SP303-201ENST00000516192 130 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 OR7E128P-201ENST00000532736 1024 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 AC006518.2-201ENST00000542513 940 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 AC090022.1-201ENST00000546569 311 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 SUMO2P15-201ENST00000604285 278 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 AC114878.2-201ENST00000604863 1251 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 OR2BH1P-201ENST00000608850 864 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 AC010632.3-201ENST00000611377 369 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 AC093783.1-201ENST00000612976 329 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 AC123767.1-202ENST00000620407 817 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 AC138907.10-201ENST00000623708 983 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS50Q96JG6 HSPA8P17-201ENST00000427029 1382 ntBASIC5.36□□□□□ -1.55
VPS50Q96JG6 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS50Q96JG6 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS50Q96JG6 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS50Q96JG6 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS50Q96JG6 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms