Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC106872.4-201ENST00000510050 523 ntBASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 RFPL4AP5-201ENST00000514977 504 ntBASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 RNU6-1028P-201ENST00000517164 93 ntBASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 RPL10P14-201ENST00000565265 298 ntBASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 AL022394.1-201ENST00000606979 292 ntBASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 AC004908.3-201ENST00000610248 625 ntBASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 AL450345.1-202ENST00000605741 3881 ntBASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 TRIM51GP-201ENST00000534741 1350 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 CR788268.1-201ENST00000603931 1809 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 RNU6-906P-201ENST00000384700 70 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 RNU6-932P-201ENST00000391108 106 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 U3.25-201ENST00000391209 220 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 AC092638.1-201ENST00000411966 1275 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 HMGB3P31-201ENST00000413333 595 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 GTF2IP5-201ENST00000414608 731 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 DPY19L1P2-201ENST00000426647 915 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 RPS4XP16-201ENST00000427198 791 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 NPM1P22-201ENST00000427761 952 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 AC090804.1-201ENST00000448870 490 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 MTND1P31-201ENST00000449206 961 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 RPL6P9-201ENST00000466502 859 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 RPL7P39-201ENST00000481157 744 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 RPL7P41-201ENST00000485823 957 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 EIF3LP3-201ENST00000495197 822 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 RN7SL101P-201ENST00000496350 279 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 RNU6-1004P-201ENST00000516584 111 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 AC092709.1-201ENST00000521355 1045 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 LRRC6P1-201ENST00000532188 885 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 AC139103.1-201ENST00000534696 1030 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 NMNAT1P5-201ENST00000559657 841 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 AC009597.2-201ENST00000604659 592 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 AC005377.1-201ENST00000605126 456 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 AC079395.3-201ENST00000615161 484 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 AC048344.4-201ENST00000619744 527 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 MIR6837-201ENST00000620884 64 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
CDK5RAP3Q96JB5 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 MFSD8-220ENST00000641243 1422 ntBASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CDK5RAP3Q96JB5 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms