Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
HPS1Q92902 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HPS1Q92902 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HPS1Q92902 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
HPS1Q92902 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
HPS1Q92902 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HPS1Q92902 GTF2H2B-203ENST00000508065 1432 ntBASIC6.92□□□□□ -1.3
HPS1Q92902 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC6.92□□□□□ -1.3
HPS1Q92902 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
HPS1Q92902 AC105074.1-201ENST00000623380 3095 ntBASIC6.92□□□□□ -1.3
HPS1Q92902 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
HPS1Q92902 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HPS1Q92902 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HPS1Q92902 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.91□□□□□ -1.3
HPS1Q92902 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
HPS1Q92902 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
HPS1Q92902 AC007406.5-201ENST00000570140 3170 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HPS1Q92902 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HPS1Q92902 AL080312.1-201ENST00000256654 824 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
HPS1Q92902 RN7SKP76-201ENST00000364419 323 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 RN7SKP47-201ENST00000365347 328 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 Y_RNA.350-201ENST00000365409 98 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 RNU6-606P-201ENST00000384721 111 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 AL139397.2-201ENST00000404529 772 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 RN7SKP232-201ENST00000410170 290 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 AL357752.1-201ENST00000412817 349 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.91□□□□□ -1.3
HPS1Q92902 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC6.91□□□□□ -1.3
HPS1Q92902 YBX1P8-201ENST00000421881 943 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 AL353777.1-201ENST00000425552 326 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HPS1Q92902 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC6.91□□□□□ -1.3
HPS1Q92902 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC6.91□□□□□ -1.3
HPS1Q92902 RSU1P2-202ENST00000437884 485 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 ACTP1-201ENST00000440793 383 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC6.91□□□□□ -1.3
HPS1Q92902 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC6.91□□□□□ -1.3
HPS1Q92902 OR7H1P-201ENST00000448965 922 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 MGAT2P1-201ENST00000449718 797 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.91□□□□□ -1.3
HPS1Q92902 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 GAPDHP14-201ENST00000450472 937 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC6.91□□□□□ -1.3
HPS1Q92902 HMGB1P15-201ENST00000453854 435 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 AC096922.1-201ENST00000461635 651 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 TAAR3P-201ENST00000466706 1078 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.91□□□□□ -1.3
HPS1Q92902 TAAR3P-202ENST00000481759 1025 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.91□□□□□ -1.3
HPS1Q92902 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC6.91□□□□□ -1.3
HPS1Q92902 AC091965.3-201ENST00000506236 208 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 RNU6-182P-201ENST00000516970 105 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.91□□□□□ -1.3
HPS1Q92902 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.91□□□□□ -1.3
HPS1Q92902 AC090572.1-201ENST00000519251 160 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 IGLVI-42-201ENST00000522485 381 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 PPP1R1AP1-201ENST00000525622 425 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC6.91□□□□□ -1.3
HPS1Q92902 MIR3689F-201ENST00000579617 66 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 MIR548AI-201ENST00000579940 88 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 MIR3942-201ENST00000585264 109 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC6.91□□□□□ -1.3
HPS1Q92902 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.91□□□□□ -1.3
HPS1Q92902 ACP5-208ENST00000590420 301 ntTSL 5 BASIC6.91□□□□□ -1.3
HPS1Q92902 AC068802.1-201ENST00000603420 732 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 AL022099.1-201ENST00000604551 712 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 YTHDF2P1-201ENST00000604759 1271 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HPS1Q92902 AC123788.2-201ENST00000612290 283 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 7SK.12-201ENST00000612820 244 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 AC026634.1-201ENST00000634369 198 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HPS1Q92902 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HPS1Q92902 ZNF652P1-201ENST00000442420 1309 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
HPS1Q92902 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
HPS1Q92902 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HPS1Q92902 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.91□□□□□ -1.3
HPS1Q92902 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.91□□□□□ -1.3
HPS1Q92902 AL049780.3-201ENST00000624612 1583 ntBASIC6.91□□□□□ -1.3
HPS1Q92902 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HPS1Q92902 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
HPS1Q92902 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
HPS1Q92902 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HPS1Q92902 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.9□□□□□ -1.3
HPS1Q92902 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC6.9□□□□□ -1.3
HPS1Q92902 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HPS1Q92902 CUBNP3-201ENST00000457461 1784 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 MGC27382-202ENST00000436742 1993 ntTSL 2 BASIC6.9□□□□□ -1.3
HPS1Q92902 SNORA71D-201ENST00000363484 134 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 RNU6-522P-201ENST00000364497 107 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 MRPL55-211ENST00000366738 705 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HPS1Q92902 RNU6-730P-201ENST00000383954 104 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 Y_RNA.512-201ENST00000384518 102 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 MIR1-2-201ENST00000384961 85 ntBASIC6.9□□□□□ -1.3
HPS1Q92902 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
HPS1Q92902 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms