Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 VN2R3P-201ENST00000422626 1412 ntBASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 AL592148.3-201ENST00000608771 2646 ntBASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 RNU1-83P-201ENST00000363426 164 ntBASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 MIR659-201ENST00000384963 97 ntBASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 CEACAMP8-201ENST00000413902 580 ntBASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 RPL12P28-201ENST00000430852 489 ntBASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 RPEP2-201ENST00000432149 701 ntBASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 RPL12P18-201ENST00000437175 325 ntBASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 AC011005.3-201ENST00000491624 395 ntBASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 RNU1-45P-201ENST00000517191 141 ntBASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 AC006130.2-201ENST00000586202 326 ntBASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 AL445567.2-201ENST00000618935 498 ntBASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 AC009120.7-201ENST00000623452 780 ntBASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 AC126323.6-202ENST00000568092 3511 ntBASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 GVINP1-202ENST00000531871 7271 ntBASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SHROOM3Q8TF72 AP001002.1-201ENST00000625148 1513 ntBASIC4.68□□□□□ -1.66
SHROOM3Q8TF72 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHROOM3Q8TF72 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.68□□□□□ -1.66
SHROOM3Q8TF72 TCP11X1-202ENST00000622971 1372 ntBASIC4.68□□□□□ -1.66
SHROOM3Q8TF72 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHROOM3Q8TF72 AL607077.1-201ENST00000401718 499 ntBASIC4.68□□□□□ -1.66
SHROOM3Q8TF72 RPL23AP1-201ENST00000428990 471 ntBASIC4.68□□□□□ -1.66
SHROOM3Q8TF72 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.68□□□□□ -1.66
SHROOM3Q8TF72 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.68□□□□□ -1.66
SHROOM3Q8TF72 ISCUP1-201ENST00000454451 448 ntBASIC4.68□□□□□ -1.66
SHROOM3Q8TF72 AC010618.1-201ENST00000469924 477 ntBASIC4.68□□□□□ -1.66
SHROOM3Q8TF72 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.68□□□□□ -1.66
SHROOM3Q8TF72 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.68□□□□□ -1.66
SHROOM3Q8TF72 MTCO1P35-201ENST00000515270 228 ntBASIC4.68□□□□□ -1.66
SHROOM3Q8TF72 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.68□□□□□ -1.66
SHROOM3Q8TF72 AL161637.1-201ENST00000622380 412 ntBASIC4.68□□□□□ -1.66
SHROOM3Q8TF72 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.68□□□□□ -1.66
SHROOM3Q8TF72 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
SHROOM3Q8TF72 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
SHROOM3Q8TF72 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SHROOM3Q8TF72 AC097063.1-201ENST00000426714 1797 ntBASIC4.68□□□□□ -1.66
SHROOM3Q8TF72 AL133268.1-201ENST00000405676 1401 ntBASIC4.68□□□□□ -1.66
SHROOM3Q8TF72 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SHROOM3Q8TF72 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 RNU1-20P-201ENST00000363314 162 ntBASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 SNORD113.2-201ENST00000364166 89 ntBASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 RNA5SP151-201ENST00000365632 117 ntBASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 AC008782.1-201ENST00000603386 430 ntBASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 AC027290.2-201ENST00000623210 18662 ntBASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 AC017104.4-201ENST00000636283 1592 ntBASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 SNORD96B-201ENST00000386148 79 ntBASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 RPL12P34-201ENST00000424532 479 ntBASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 EIF2S2P2-201ENST00000447161 982 ntBASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 VN1R34P-201ENST00000447387 883 ntBASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 MTND2P28-201ENST00000457540 1044 ntBASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 AC111000.3-201ENST00000508057 576 ntBASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 AL161756.2-201ENST00000604597 246 ntBASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 UGT2B26P-201ENST00000508672 1613 ntBASIC4.67□□□□□ -1.66
SHROOM3Q8TF72 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHROOM3Q8TF72 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms