Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SHKBP1Q8TBC3 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 RNA5SP333-201ENST00000363466 118 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 RNA5SP334-201ENST00000364825 118 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 TRAV35-201ENST00000390462 330 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 RNA5SP80-201ENST00000410475 111 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 AC130360.1-201ENST00000425489 1117 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 ZYG11AP1-201ENST00000430329 837 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 PA2G4P6-201ENST00000438325 1197 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 RAB28P3-201ENST00000448325 597 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 BZW1P1-201ENST00000454901 1240 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 AC106800.3-201ENST00000511389 308 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 PRMT5P1-201ENST00000514351 598 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 RNU6-327P-201ENST00000516270 127 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 AC060775.1-201ENST00000518241 520 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 IGLVIV-64-201ENST00000518581 301 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 AC130365.2-201ENST00000525882 1201 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 AC022690.1-201ENST00000526681 550 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 KCTD9P4-201ENST00000526766 1166 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 OR5AQ1P-201ENST00000527596 927 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 GTF2IP22-201ENST00000554443 182 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 AC068768.2-201ENST00000602352 343 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 SEPT7P9-203ENST00000604116 343 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 AC138305.3-201ENST00000624988 240 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 BX284613.1-201ENST00000452221 1641 ntBASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHKBP1Q8TBC3 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 RPS27AP11-201ENST00000402798 447 ntBASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 PNPLA4P1-201ENST00000458328 305 ntBASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 AC018638.3-201ENST00000461273 132 ntBASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 MTND1P16-201ENST00000465177 898 ntBASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 SNORA58-201ENST00000505219 137 ntBASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 ATP1B1P1-201ENST00000509767 915 ntBASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 LRRC34P2-201ENST00000514850 553 ntBASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 AP002453.2-201ENST00000533503 320 ntBASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 OR7K1P-201ENST00000546439 926 ntBASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 MIR3614-201ENST00000581261 86 ntBASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 MIR548AB-201ENST00000584917 84 ntBASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 AL591167.1-201ENST00000607321 456 ntBASIC6.55□□□□□ -1.36
SHKBP1Q8TBC3 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms