Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RTL9Q8NET4 AC104118.1-201ENST00000607625 1589 ntBASIC5.62□□□□□ -1.51
RTL9Q8NET4 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RTL9Q8NET4 AL121657.1-201ENST00000327215 531 ntBASIC5.62□□□□□ -1.51
RTL9Q8NET4 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RTL9Q8NET4 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RTL9Q8NET4 SNORA70C-201ENST00000384538 135 ntBASIC5.62□□□□□ -1.51
RTL9Q8NET4 NPM1P38-201ENST00000403835 865 ntBASIC5.62□□□□□ -1.51
RTL9Q8NET4 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.62□□□□□ -1.51
RTL9Q8NET4 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.62□□□□□ -1.51
RTL9Q8NET4 RPS29P17-201ENST00000430795 166 ntBASIC5.62□□□□□ -1.51
RTL9Q8NET4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.62□□□□□ -1.51
RTL9Q8NET4 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.62□□□□□ -1.51
RTL9Q8NET4 RPL12P18-201ENST00000437175 325 ntBASIC5.62□□□□□ -1.51
RTL9Q8NET4 RPL7P19-201ENST00000469948 618 ntBASIC5.62□□□□□ -1.51
RTL9Q8NET4 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.62□□□□□ -1.51
RTL9Q8NET4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.62□□□□□ -1.51
RTL9Q8NET4 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.62□□□□□ -1.51
RTL9Q8NET4 OR8A2P-201ENST00000528631 952 ntBASIC5.62□□□□□ -1.51
RTL9Q8NET4 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RTL9Q8NET4 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
RTL9Q8NET4 AC025884.1-201ENST00000556034 378 ntBASIC5.62□□□□□ -1.51
RTL9Q8NET4 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.62□□□□□ -1.51
RTL9Q8NET4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.62□□□□□ -1.51
RTL9Q8NET4 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.62□□□□□ -1.51
RTL9Q8NET4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RTL9Q8NET4 AC068870.3-201ENST00000625077 2536 ntBASIC5.62□□□□□ -1.51
RTL9Q8NET4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RTL9Q8NET4 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.62□□□□□ -1.51
RTL9Q8NET4 AC023632.6-201ENST00000624338 2177 ntBASIC5.62□□□□□ -1.51
RTL9Q8NET4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.62□□□□□ -1.51
RTL9Q8NET4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RTL9Q8NET4 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.61□□□□□ -1.51
RTL9Q8NET4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.61□□□□□ -1.51
RTL9Q8NET4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RTL9Q8NET4 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RTL9Q8NET4 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RTL9Q8NET4 NOL8P1-201ENST00000508336 3529 ntBASIC5.61□□□□□ -1.51
RTL9Q8NET4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RTL9Q8NET4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
RTL9Q8NET4 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RTL9Q8NET4 RPL32P23-201ENST00000397237 405 ntBASIC5.61□□□□□ -1.51
RTL9Q8NET4 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.61□□□□□ -1.51
RTL9Q8NET4 AC017078.1-201ENST00000416146 368 ntBASIC5.61□□□□□ -1.51
RTL9Q8NET4 RPL21P43-201ENST00000425440 472 ntBASIC5.61□□□□□ -1.51
RTL9Q8NET4 OR4C10P-201ENST00000434991 931 ntBASIC5.61□□□□□ -1.51
RTL9Q8NET4 NMNAT1P2-201ENST00000435192 860 ntBASIC5.61□□□□□ -1.51
RTL9Q8NET4 NUTF2P3-201ENST00000448540 384 ntBASIC5.61□□□□□ -1.51
RTL9Q8NET4 AC091167.1-201ENST00000492017 396 ntBASIC5.61□□□□□ -1.51
RTL9Q8NET4 HMGB3P16-201ENST00000508037 287 ntBASIC5.61□□□□□ -1.51
RTL9Q8NET4 MRPL49P2-201ENST00000521066 465 ntBASIC5.61□□□□□ -1.51
RTL9Q8NET4 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.61□□□□□ -1.51
RTL9Q8NET4 RNF138P2-201ENST00000603490 592 ntBASIC5.61□□□□□ -1.51
RTL9Q8NET4 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RTL9Q8NET4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RTL9Q8NET4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RTL9Q8NET4 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
RTL9Q8NET4 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
RTL9Q8NET4 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.61□□□□□ -1.51
RTL9Q8NET4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RTL9Q8NET4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RTL9Q8NET4 AP001157.1-201ENST00000550837 2339 ntBASIC5.6□□□□□ -1.51
RTL9Q8NET4 AC100871.1-201ENST00000507871 1456 ntBASIC5.6□□□□□ -1.51
RTL9Q8NET4 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.6□□□□□ -1.51
RTL9Q8NET4 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.6□□□□□ -1.51
RTL9Q8NET4 OR5P1P-201ENST00000299512 925 ntBASIC5.6□□□□□ -1.51
RTL9Q8NET4 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RTL9Q8NET4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.6□□□□□ -1.51
RTL9Q8NET4 RPL7P33-201ENST00000444159 742 ntBASIC5.6□□□□□ -1.51
RTL9Q8NET4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.6□□□□□ -1.51
RTL9Q8NET4 DHFRP3-201ENST00000455595 559 ntBASIC5.6□□□□□ -1.51
RTL9Q8NET4 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.6□□□□□ -1.51
RTL9Q8NET4 USP9YP2-201ENST00000504503 1000 ntBASIC5.6□□□□□ -1.51
RTL9Q8NET4 USP9YP1-201ENST00000513521 1002 ntBASIC5.6□□□□□ -1.51
RTL9Q8NET4 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.6□□□□□ -1.51
RTL9Q8NET4 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RTL9Q8NET4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.6□□□□□ -1.51
RTL9Q8NET4 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.6□□□□□ -1.51
RTL9Q8NET4 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.6□□□□□ -1.51
RTL9Q8NET4 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RTL9Q8NET4 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RTL9Q8NET4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.6□□□□□ -1.51
RTL9Q8NET4 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RTL9Q8NET4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RTL9Q8NET4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RTL9Q8NET4 AL136164.3-201ENST00000624429 3978 ntBASIC5.6□□□□□ -1.51
RTL9Q8NET4 ASNSP1-204ENST00000641977 1664 ntBASIC5.6□□□□□ -1.51
RTL9Q8NET4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RTL9Q8NET4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RTL9Q8NET4 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.59□□□□□ -1.51
RTL9Q8NET4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RTL9Q8NET4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RTL9Q8NET4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.59□□□□□ -1.51
RTL9Q8NET4 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
RTL9Q8NET4 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.59□□□□□ -1.51
RTL9Q8NET4 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
RTL9Q8NET4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RTL9Q8NET4 UBBP2-201ENST00000376781 231 ntBASIC5.59□□□□□ -1.51
RTL9Q8NET4 SNORA48.7-201ENST00000391302 135 ntBASIC5.59□□□□□ -1.51
RTL9Q8NET4 AC025750.1-201ENST00000399891 379 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms