Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 RNU6-619P-201ENST00000365146 108 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 SNORA5.1-201ENST00000384275 131 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 RNU6-253P-201ENST00000384730 105 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 MIR217-201ENST00000384817 110 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 RNU2-22P-201ENST00000411266 212 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 TPMTP3-201ENST00000411928 735 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AC245096.1-201ENST00000413104 546 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 MTND1P4-201ENST00000435196 415 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 ARAFP2-201ENST00000440565 559 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 COX6CP2-201ENST00000444980 225 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 ZNF619P1-201ENST00000446539 752 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 COX4I1P2-201ENST00000447446 547 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 MTCYBP1-201ENST00000454315 1119 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 PNPLA4P1-201ENST00000458328 305 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 MTND1P16-201ENST00000465177 898 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 RPL23AP40-201ENST00000487630 390 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 RN7SKP31-201ENST00000516354 278 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 Y_RNA.710-201ENST00000516975 110 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 HMGB1P23-201ENST00000518743 568 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 IGKV2D-10-201ENST00000520194 281 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 SMARCE1P4-201ENST00000523647 241 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 CYCSP25-201ENST00000525280 316 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 EIF1P4-201ENST00000572664 335 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AP005262.1-201ENST00000582646 997 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AC107982.3-201ENST00000584957 985 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AL353726.1-201ENST00000614041 1000 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 WT1-AS_8.1-201ENST00000615200 275 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AC145207.9-201ENST00000623802 325 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AC135068.5-201ENST00000624197 983 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 AC127502.3-201ENST00000636170 1206 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 HSPD1P9-201ENST00000420325 1636 ntBASIC5.72□□□□□ -1.49
HIPK4Q8NE63 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HIPK4Q8NE63 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HIPK4Q8NE63 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
HIPK4Q8NE63 Z99496.1-201ENST00000469424 1477 ntBASIC5.71□□□□□ -1.49
HIPK4Q8NE63 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.71□□□□□ -1.49
HIPK4Q8NE63 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.71□□□□□ -1.49
HIPK4Q8NE63 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HIPK4Q8NE63 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HIPK4Q8NE63 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HIPK4Q8NE63 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HIPK4Q8NE63 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HIPK4Q8NE63 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HIPK4Q8NE63 RNA5SP346-201ENST00000363541 121 ntBASIC5.71□□□□□ -1.5
HIPK4Q8NE63 RNA5SP85-201ENST00000365378 119 ntBASIC5.71□□□□□ -1.5
HIPK4Q8NE63 RNU6-1215P-201ENST00000384441 102 ntBASIC5.71□□□□□ -1.5
HIPK4Q8NE63 Y_RNA.517-201ENST00000384551 106 ntBASIC5.71□□□□□ -1.5
HIPK4Q8NE63 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HIPK4Q8NE63 AC003045.1-201ENST00000398779 713 ntBASIC5.71□□□□□ -1.5
HIPK4Q8NE63 DEFB108C-201ENST00000400154 252 ntBASIC5.71□□□□□ -1.5
HIPK4Q8NE63 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.71□□□□□ -1.5
HIPK4Q8NE63 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.71□□□□□ -1.5
HIPK4Q8NE63 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.71□□□□□ -1.5
HIPK4Q8NE63 IPPKP1-201ENST00000422501 768 ntBASIC5.71□□□□□ -1.5
HIPK4Q8NE63 VTI1BP4-201ENST00000427516 527 ntBASIC5.71□□□□□ -1.5
HIPK4Q8NE63 MED14P1-201ENST00000430517 648 ntBASIC5.71□□□□□ -1.5
HIPK4Q8NE63 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.71□□□□□ -1.5
HIPK4Q8NE63 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.71□□□□□ -1.5
HIPK4Q8NE63 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.71□□□□□ -1.5
HIPK4Q8NE63 MED28P3-201ENST00000444288 531 ntBASIC5.71□□□□□ -1.5
HIPK4Q8NE63 AL137845.2-201ENST00000444292 988 ntBASIC5.71□□□□□ -1.5
HIPK4Q8NE63 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms