Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC018442.3-201ENST00000523025 183 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 OR11H3P-201ENST00000554547 982 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 AC091042.1-201ENST00000579213 173 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 AC010487.1-201ENST00000594408 1172 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 AC009027.1-201ENST00000604510 479 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 AC135068.5-201ENST00000624197 983 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 AC083865.1-201ENST00000636634 831 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 HSPA8P19-201ENST00000505359 1517 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 CASC19-261ENST00000641853 1638 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 RNA5SP90-201ENST00000364801 99 ntBASIC5.61□□□□□ -1.51
HERC6Q8IVU3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 SNORD56.6-201ENST00000384569 71 ntBASIC5.61□□□□□ -1.51
HERC6Q8IVU3 RNU6-225P-201ENST00000384613 103 ntBASIC5.61□□□□□ -1.51
HERC6Q8IVU3 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 AP000357.1-201ENST00000409926 1165 ntBASIC5.61□□□□□ -1.51
HERC6Q8IVU3 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 RN7SKP222-201ENST00000410651 315 ntBASIC5.61□□□□□ -1.51
HERC6Q8IVU3 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 P2RY10P2-201ENST00000416730 913 ntBASIC5.61□□□□□ -1.51
HERC6Q8IVU3 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 AL645931.1-201ENST00000439737 410 ntBASIC5.61□□□□□ -1.51
HERC6Q8IVU3 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 RPL5P25-201ENST00000441148 775 ntBASIC5.61□□□□□ -1.51
HERC6Q8IVU3 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 OR52J1P-201ENST00000450596 932 ntBASIC5.61□□□□□ -1.51
HERC6Q8IVU3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 ASNSP4-201ENST00000511103 447 ntBASIC5.61□□□□□ -1.51
HERC6Q8IVU3 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 AC106734.1-201ENST00000568646 663 ntBASIC5.61□□□□□ -1.51
HERC6Q8IVU3 MIR3667-201ENST00000581025 74 ntBASIC5.61□□□□□ -1.51
HERC6Q8IVU3 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 AP001029.2-203ENST00000589795 4910 ntBASIC5.61□□□□□ -1.51
HERC6Q8IVU3 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 BNIP3P39-201ENST00000601077 554 ntBASIC5.61□□□□□ -1.51
HERC6Q8IVU3 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 AC007786.3-201ENST00000615154 596 ntBASIC5.61□□□□□ -1.51
HERC6Q8IVU3 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 RMST_10.1-201ENST00000616309 154 ntBASIC5.61□□□□□ -1.51
HERC6Q8IVU3 AL034549.2-201ENST00000618285 3373 ntBASIC5.61□□□□□ -1.51
HERC6Q8IVU3 uc_338.7-201ENST00000621834 124 ntBASIC5.61□□□□□ -1.51
HERC6Q8IVU3 AP003497.2-201ENST00000624220 967 ntBASIC5.61□□□□□ -1.51
HERC6Q8IVU3 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HERC6Q8IVU3 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.6□□□□□ -1.51
HERC6Q8IVU3 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 RN7SKP145-201ENST00000363291 303 ntBASIC5.6□□□□□ -1.51
HERC6Q8IVU3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 OR51A6P-201ENST00000418680 1004 ntBASIC5.6□□□□□ -1.51
HERC6Q8IVU3 EIF4A1P1-201ENST00000420241 934 ntBASIC5.6□□□□□ -1.51
HERC6Q8IVU3 AC013410.2-201ENST00000422627 201 ntBASIC5.6□□□□□ -1.51
HERC6Q8IVU3 AC013262.1-201ENST00000426710 252 ntBASIC5.6□□□□□ -1.51
HERC6Q8IVU3 AC006994.1-201ENST00000438212 839 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms