Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 RNA5SP154-201ENST00000516193 111 ntBASIC4.15□□□□□ -1.75
LRRC28Q86X40 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.15□□□□□ -1.75
LRRC28Q86X40 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.15□□□□□ -1.75
LRRC28Q86X40 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.15□□□□□ -1.75
LRRC28Q86X40 GCSHP4-201ENST00000538792 439 ntBASIC4.15□□□□□ -1.75
LRRC28Q86X40 AC069240.1-201ENST00000548774 375 ntBASIC4.15□□□□□ -1.75
LRRC28Q86X40 FKBP1BP1-201ENST00000553366 325 ntBASIC4.15□□□□□ -1.75
LRRC28Q86X40 MIR4480-201ENST00000582492 71 ntBASIC4.15□□□□□ -1.75
LRRC28Q86X40 AC116651.1-201ENST00000609724 556 ntBASIC4.15□□□□□ -1.75
LRRC28Q86X40 Mico1.1-201ENST00000611698 204 ntBASIC4.15□□□□□ -1.75
LRRC28Q86X40 AC023509.5-201ENST00000617434 807 ntBASIC4.15□□□□□ -1.75
LRRC28Q86X40 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.15□□□□□ -1.75
LRRC28Q86X40 AP001784.1-201ENST00000624107 428 ntBASIC4.15□□□□□ -1.75
LRRC28Q86X40 AC011815.3-201ENST00000624194 473 ntBASIC4.15□□□□□ -1.75
LRRC28Q86X40 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.15□□□□□ -1.75
LRRC28Q86X40 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.15□□□□□ -1.75
LRRC28Q86X40 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.15□□□□□ -1.75
LRRC28Q86X40 MAPK10-263ENST00000641052 4307 ntBASIC4.15□□□□□ -1.75
LRRC28Q86X40 AL133243.3-201ENST00000617415 3004 ntBASIC4.15□□□□□ -1.75
LRRC28Q86X40 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
LRRC28Q86X40 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LRRC28Q86X40 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LRRC28Q86X40 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.14□□□□□ -1.75
LRRC28Q86X40 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
LRRC28Q86X40 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
LRRC28Q86X40 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
LRRC28Q86X40 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
LRRC28Q86X40 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
LRRC28Q86X40 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRRC28Q86X40 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRRC28Q86X40 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.14□□□□□ -1.75
LRRC28Q86X40 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LRRC28Q86X40 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.14□□□□□ -1.75
LRRC28Q86X40 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.14□□□□□ -1.75
LRRC28Q86X40 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.14□□□□□ -1.75
LRRC28Q86X40 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.14□□□□□ -1.75
LRRC28Q86X40 AL035419.1-201ENST00000397037 564 ntBASIC4.14□□□□□ -1.75
LRRC28Q86X40 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRRC28Q86X40 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.14□□□□□ -1.75
LRRC28Q86X40 OR51A6P-201ENST00000418680 1004 ntBASIC4.14□□□□□ -1.75
LRRC28Q86X40 AL034379.1-201ENST00000423216 253 ntBASIC4.14□□□□□ -1.75
LRRC28Q86X40 RPS12P5-201ENST00000423449 371 ntBASIC4.14□□□□□ -1.75
LRRC28Q86X40 IPMKP1-201ENST00000425988 855 ntBASIC4.14□□□□□ -1.75
LRRC28Q86X40 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.14□□□□□ -1.75
LRRC28Q86X40 OR52J1P-201ENST00000450596 932 ntBASIC4.14□□□□□ -1.75
LRRC28Q86X40 RPL35AP28-201ENST00000459730 331 ntBASIC4.14□□□□□ -1.75
LRRC28Q86X40 AC092324.1-201ENST00000468671 324 ntBASIC4.14□□□□□ -1.75
LRRC28Q86X40 RPS23P1-201ENST00000491662 432 ntBASIC4.14□□□□□ -1.75
LRRC28Q86X40 AC025445.1-201ENST00000502728 300 ntBASIC4.14□□□□□ -1.75
LRRC28Q86X40 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LRRC28Q86X40 AC008694.2-201ENST00000517591 306 ntBASIC4.14□□□□□ -1.75
LRRC28Q86X40 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.14□□□□□ -1.75
LRRC28Q86X40 HMGB3P26-201ENST00000560051 582 ntBASIC4.14□□□□□ -1.75
LRRC28Q86X40 AC009117.1-201ENST00000563948 554 ntBASIC4.14□□□□□ -1.75
LRRC28Q86X40 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LRRC28Q86X40 AL353726.1-201ENST00000614041 1000 ntBASIC4.14□□□□□ -1.75
LRRC28Q86X40 AC087385.3-201ENST00000620477 187 ntBASIC4.14□□□□□ -1.75
LRRC28Q86X40 AP002967.1-201ENST00000624203 539 ntBASIC4.14□□□□□ -1.75
LRRC28Q86X40 BMS1P21-201ENST00000634565 365 ntBASIC4.14□□□□□ -1.75
LRRC28Q86X40 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRRC28Q86X40 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRRC28Q86X40 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LRRC28Q86X40 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRRC28Q86X40 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.14□□□□□ -1.75
LRRC28Q86X40 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.14□□□□□ -1.75
LRRC28Q86X40 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.13□□□□□ -1.75
LRRC28Q86X40 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LRRC28Q86X40 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LRRC28Q86X40 AC087190.4-201ENST00000574616 8334 ntBASIC4.13□□□□□ -1.75
LRRC28Q86X40 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
LRRC28Q86X40 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LRRC28Q86X40 AC103591.2-201ENST00000265259 766 ntBASIC4.13□□□□□ -1.75
LRRC28Q86X40 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.13□□□□□ -1.75
LRRC28Q86X40 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.13□□□□□ -1.75
LRRC28Q86X40 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
LRRC28Q86X40 RNA5SP345-201ENST00000410646 108 ntBASIC4.13□□□□□ -1.75
LRRC28Q86X40 RNA5SP104-201ENST00000410989 118 ntBASIC4.13□□□□□ -1.75
LRRC28Q86X40 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LRRC28Q86X40 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.13□□□□□ -1.75
LRRC28Q86X40 AC007559.1-201ENST00000428736 355 ntBASIC4.13□□□□□ -1.75
LRRC28Q86X40 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.13□□□□□ -1.75
LRRC28Q86X40 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.13□□□□□ -1.75
LRRC28Q86X40 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.13□□□□□ -1.75
LRRC28Q86X40 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.13□□□□□ -1.75
LRRC28Q86X40 SLC25A18P1-201ENST00000449385 454 ntBASIC4.13□□□□□ -1.75
LRRC28Q86X40 FGF7P3-201ENST00000454645 303 ntBASIC4.13□□□□□ -1.75
LRRC28Q86X40 AC091685.2-201ENST00000454924 864 ntBASIC4.13□□□□□ -1.75
LRRC28Q86X40 AC083982.1-201ENST00000485679 344 ntBASIC4.13□□□□□ -1.75
LRRC28Q86X40 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.13□□□□□ -1.75
LRRC28Q86X40 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.13□□□□□ -1.75
LRRC28Q86X40 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LRRC28Q86X40 RNA5SP446-201ENST00000515955 82 ntBASIC4.13□□□□□ -1.75
LRRC28Q86X40 AC018442.3-201ENST00000523025 183 ntBASIC4.13□□□□□ -1.75
LRRC28Q86X40 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.13□□□□□ -1.75
LRRC28Q86X40 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.13□□□□□ -1.75
LRRC28Q86X40 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.13□□□□□ -1.75
LRRC28Q86X40 AC008966.2-201ENST00000606157 453 ntBASIC4.13□□□□□ -1.75
LRRC28Q86X40 FAM25E-202ENST00000608562 189 ntBASIC4.13□□□□□ -1.75
LRRC28Q86X40 AC020763.5-201ENST00000623298 430 ntBASIC4.13□□□□□ -1.75
LRRC28Q86X40 CR381572.2-201ENST00000624852 397 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms