Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 AL139148.1-201ENST00000427122 680 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 BRWD1P3-201ENST00000428816 390 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 ARL4AP4-201ENST00000434170 518 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 LYPLA1P1-201ENST00000434514 622 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 RPL7P29-201ENST00000437151 728 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 CNOT7P2-201ENST00000441051 832 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 GTF3AP5-201ENST00000442645 697 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 KNOP1P3-201ENST00000446933 426 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 PTMAP3-201ENST00000447474 330 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 AL389915.2-201ENST00000454576 441 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 RPL37P3-201ENST00000456825 293 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 AC010683.1-201ENST00000473673 378 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 RPL7P39-201ENST00000481157 744 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 RPS4XP14-201ENST00000493072 781 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 AC072052.1-201ENST00000496556 306 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 GTF2F2P1-201ENST00000511083 675 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 VTA1P2-201ENST00000520205 911 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 BUD31P1-201ENST00000521828 359 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 AP003049.1-201ENST00000529418 457 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 AC006349.1-201ENST00000555526 235 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 MTND4LP25-201ENST00000570218 163 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 AP005262.1-201ENST00000582646 997 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 AC005034.4-201ENST00000603612 899 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 AC018695.5-201ENST00000605872 315 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 AC011374.2-201ENST00000607135 526 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 AC100847.1-201ENST00000611316 481 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 AC009318.3-201ENST00000616916 503 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 CR392039.4-201ENST00000624968 501 ntBASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NHLRC1Q6VVB1 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 AC006042.3-201ENST00000454684 1469 ntBASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 AL512283.1-201ENST00000606756 1384 ntBASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 ZNF652P1-201ENST00000442420 1309 ntBASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 SNORA17.1-201ENST00000362945 126 ntBASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 RNU6-252P-201ENST00000363232 107 ntBASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 RNU6-171P-201ENST00000384354 107 ntBASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 MIR600-201ENST00000385007 98 ntBASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 AL390316.1-201ENST00000406279 553 ntBASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 AC010385.1-201ENST00000412374 256 ntBASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 MORF4L1P7-201ENST00000426038 703 ntBASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 AC093422.3-201ENST00000428506 305 ntBASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 AC005033.1-201ENST00000428904 813 ntBASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 BX323845.1-201ENST00000432417 179 ntBASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 AC092647.2-201ENST00000452998 253 ntBASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 APOOP2-201ENST00000461561 539 ntBASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 AC009127.1-201ENST00000467090 155 ntBASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 RN7SL727P-201ENST00000482164 296 ntBASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 UBA52P3-201ENST00000491303 382 ntBASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 RN7SL441P-201ENST00000492388 296 ntBASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 SNRPCP2-201ENST00000504370 475 ntBASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 OR11J2P-201ENST00000555298 907 ntBASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms