Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 ANKRD26P2-201ENST00000445530 1710 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 SSX6-201ENST00000376932 562 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 RNU6-1103P-201ENST00000384150 107 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 Y_RNA.579-201ENST00000390939 94 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 MIR541-201ENST00000401360 84 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 AL049693.1-201ENST00000402760 611 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 AC113618.1-201ENST00000416747 285 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 SNRPEP10-201ENST00000420249 274 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 RN7SL251P-201ENST00000464175 297 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 GAPDHP39-201ENST00000481866 979 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 RPS15AP36-201ENST00000492022 382 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 H3F3AP3-201ENST00000497682 407 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 AC098799.3-201ENST00000506095 438 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 SNORA19.2-201ENST00000516013 114 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 RNU7-30P-201ENST00000516835 62 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 CDC42P3-201ENST00000518493 633 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 IGJP1-201ENST00000522682 475 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 AC027026.1-201ENST00000532323 742 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 OR5F2P-201ENST00000532761 941 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 OR5BN1P-201ENST00000532955 829 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 AC069240.2-201ENST00000550242 609 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 AC010287.1-201ENST00000566916 357 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 RN7SL32P-201ENST00000580514 281 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 AC091193.1-201ENST00000604640 448 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 AC108479.2-201ENST00000617314 601 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 uc_338.21-201ENST00000622458 147 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 SNORA43.5-201ENST00000631270 138 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 AC093591.3-201ENST00000634516 308 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 TPTEP1-208ENST00000636884 213 ntBASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
FOXR1Q6PIV2 GDI2P1-201ENST00000429312 1336 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 CYP1D1P-201ENST00000416662 1433 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 RNU6-451P-201ENST00000362921 107 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 RNY3P3-201ENST00000363816 102 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 Y_RNA.202-201ENST00000364083 110 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 RNU6-1263P-201ENST00000384601 106 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AC025750.1-201ENST00000399891 379 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 MIR1284-201ENST00000408337 120 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AL672212.1-201ENST00000422246 400 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 MTCO2P5-201ENST00000422621 426 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 DYNLL1P7-201ENST00000429273 258 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AC079781.1-201ENST00000441505 394 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AC023274.2-201ENST00000445264 521 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 CYCSP44-201ENST00000448560 313 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 RANP1-206ENST00000455094 651 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 RNU6-1208P-201ENST00000459588 107 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 RPL7P19-201ENST00000469948 618 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 RN7SL790P-201ENST00000474043 298 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 OR7E163P-201ENST00000505943 894 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 GTF2IP8-201ENST00000560687 584 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms