Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC8.04□□□□□ -1.12
CDCA8Q53HL2 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC8.04□□□□□ -1.12
CDCA8Q53HL2 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC8.04□□□□□ -1.12
CDCA8Q53HL2 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC8.04□□□□□ -1.12
CDCA8Q53HL2 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC8.04□□□□□ -1.12
CDCA8Q53HL2 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC8.04□□□□□ -1.12
CDCA8Q53HL2 NANOGP3-201ENST00000605855 286 ntBASIC8.04□□□□□ -1.12
CDCA8Q53HL2 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC8.04□□□□□ -1.12
CDCA8Q53HL2 AL159169.2-201ENST00000610061 1269 ntBASIC8.04□□□□□ -1.12
CDCA8Q53HL2 U6atac.1-201ENST00000616025 117 ntBASIC8.04□□□□□ -1.12
CDCA8Q53HL2 AC126175.1-201ENST00000617041 758 ntBASIC8.04□□□□□ -1.12
CDCA8Q53HL2 AL603839.4-201ENST00000624658 1005 ntBASIC8.04□□□□□ -1.12
CDCA8Q53HL2 AL160394.1-201ENST00000624765 724 ntBASIC8.04□□□□□ -1.12
CDCA8Q53HL2 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
CDCA8Q53HL2 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
CDCA8Q53HL2 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC8.04□□□□□ -1.12
CDCA8Q53HL2 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDCA8Q53HL2 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC8.04□□□□□ -1.12
CDCA8Q53HL2 AL662795.2-201ENST00000624252 3706 ntBASIC8.04□□□□□ -1.12
CDCA8Q53HL2 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
CDCA8Q53HL2 DMD-228ENST00000541735 7080 ntTSL 5 BASIC8.04□□□□□ -1.12
CDCA8Q53HL2 CYP4Z2P-201ENST00000423332 1512 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AC090220.1-201ENST00000593078 1699 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 TMSB4XP4-201ENST00000323496 618 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AL672167.1-206ENST00000356293 943 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 RNA5SP394-201ENST00000364216 119 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 RNU6-185P-201ENST00000384421 107 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 HMGB1P20-201ENST00000402555 677 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 NRBF2P2-201ENST00000413087 861 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 RNGTTP1-201ENST00000420965 728 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AC073410.1-201ENST00000435125 589 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AP000936.2-201ENST00000447151 681 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AC004129.2-201ENST00000457229 287 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 RPL7P41-201ENST00000485823 957 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AC009120.1-201ENST00000493458 473 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AC105384.2-201ENST00000508433 640 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AC022447.1-201ENST00000515358 464 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AC021678.3-201ENST00000517893 476 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 IGLVIV-64-201ENST00000518581 301 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 IGLV3-30-201ENST00000524362 298 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 OR5D2P-201ENST00000524390 911 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 HMGB1P42-201ENST00000532126 553 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AC005832.3-201ENST00000537929 631 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 NIFKP8-201ENST00000560500 874 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AC011260.1-201ENST00000578420 472 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 BNIP3P4-201ENST00000604946 565 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AC099842.1-201ENST00000619919 596 ntBASIC8.03□□□□□ -1.12
CDCA8Q53HL2 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDCA8Q53HL2 AL161756.3-201ENST00000641216 2071 ntBASIC8.02□□□□□ -1.12
CDCA8Q53HL2 AC003973.3-201ENST00000624863 2822 ntBASIC8.02□□□□□ -1.12
CDCA8Q53HL2 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
CDCA8Q53HL2 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC8.02□□□□□ -1.13
CDCA8Q53HL2 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CDCA8Q53HL2 CPS1-IT1-201ENST00000628368 2306 ntBASIC8.02□□□□□ -1.13
CDCA8Q53HL2 MT-RNR2-201ENST00000387347 1559 ntBASIC8.02□□□□□ -1.13
CDCA8Q53HL2 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC8.02□□□□□ -1.13
CDCA8Q53HL2 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDCA8Q53HL2 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC8.02□□□□□ -1.13
CDCA8Q53HL2 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC8.02□□□□□ -1.13
CDCA8Q53HL2 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
CDCA8Q53HL2 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CDCA8Q53HL2 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CDCA8Q53HL2 RN7SKP78-201ENST00000364711 318 ntBASIC8.02□□□□□ -1.13
CDCA8Q53HL2 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms