Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
VSX2P58304 AC093720.1-201ENST00000505681 714 ntBASIC4.48□□□□□ -1.69
VSX2P58304 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.48□□□□□ -1.69
VSX2P58304 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.48□□□□□ -1.69
VSX2P58304 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.48□□□□□ -1.69
VSX2P58304 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.48□□□□□ -1.69
VSX2P58304 OR5AN2P-201ENST00000534535 896 ntBASIC4.48□□□□□ -1.69
VSX2P58304 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.48□□□□□ -1.69
VSX2P58304 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.48□□□□□ -1.69
VSX2P58304 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.48□□□□□ -1.69
VSX2P58304 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.48□□□□□ -1.69
VSX2P58304 MIR7703-201ENST00000620784 77 ntBASIC4.48□□□□□ -1.69
VSX2P58304 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.48□□□□□ -1.69
VSX2P58304 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.48□□□□□ -1.69
VSX2P58304 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VSX2P58304 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.48□□□□□ -1.69
VSX2P58304 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
VSX2P58304 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VSX2P58304 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VSX2P58304 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VSX2P58304 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VSX2P58304 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VSX2P58304 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VSX2P58304 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VSX2P58304 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
VSX2P58304 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
VSX2P58304 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.47□□□□□ -1.69
VSX2P58304 AC119751.6-201ENST00000416712 186 ntBASIC4.47□□□□□ -1.69
VSX2P58304 AC245028.1-201ENST00000423259 256 ntBASIC4.47□□□□□ -1.69
VSX2P58304 CKS1BP6-201ENST00000424932 240 ntBASIC4.47□□□□□ -1.69
VSX2P58304 NIPA2P1-201ENST00000426223 976 ntBASIC4.47□□□□□ -1.69
VSX2P58304 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.47□□□□□ -1.69
VSX2P58304 AL359265.2-201ENST00000434367 631 ntBASIC4.47□□□□□ -1.69
VSX2P58304 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.47□□□□□ -1.69
VSX2P58304 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.47□□□□□ -1.69
VSX2P58304 AL138878.2-201ENST00000440581 1241 ntBASIC4.47□□□□□ -1.69
VSX2P58304 RHEBP2-201ENST00000450289 600 ntBASIC4.47□□□□□ -1.69
VSX2P58304 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.47□□□□□ -1.69
VSX2P58304 AL513533.1-201ENST00000453728 415 ntBASIC4.47□□□□□ -1.69
VSX2P58304 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.47□□□□□ -1.69
VSX2P58304 NDUFA12P1-201ENST00000455914 406 ntBASIC4.47□□□□□ -1.69
VSX2P58304 RPL5P16-201ENST00000471467 790 ntBASIC4.47□□□□□ -1.69
VSX2P58304 AP001960.1-201ENST00000506494 658 ntBASIC4.47□□□□□ -1.69
VSX2P58304 RFPL4AP3-201ENST00000515267 345 ntBASIC4.47□□□□□ -1.69
VSX2P58304 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.47□□□□□ -1.69
VSX2P58304 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.47□□□□□ -1.69
VSX2P58304 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.47□□□□□ -1.69
VSX2P58304 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
VSX2P58304 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.47□□□□□ -1.69
VSX2P58304 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.47□□□□□ -1.69
VSX2P58304 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.47□□□□□ -1.69
VSX2P58304 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.47□□□□□ -1.69
VSX2P58304 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.47□□□□□ -1.69
VSX2P58304 AC073091.2-201ENST00000603205 907 ntBASIC4.47□□□□□ -1.69
VSX2P58304 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.47□□□□□ -1.69
VSX2P58304 uc_338.18-201ENST00000615451 175 ntBASIC4.47□□□□□ -1.69
VSX2P58304 MIR8069-1-201ENST00000616627 86 ntBASIC4.47□□□□□ -1.69
VSX2P58304 MIR8069-2-201ENST00000621412 86 ntBASIC4.47□□□□□ -1.69
VSX2P58304 AC010435.1-201ENST00000623353 1177 ntBASIC4.47□□□□□ -1.69
VSX2P58304 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.47□□□□□ -1.69
VSX2P58304 AC021106.3-201ENST00000623925 531 ntBASIC4.47□□□□□ -1.69
VSX2P58304 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.47□□□□□ -1.69
VSX2P58304 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.47□□□□□ -1.69
VSX2P58304 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.47□□□□□ -1.69
VSX2P58304 ZFRP1-201ENST00000457579 2970 ntBASIC4.47□□□□□ -1.69
VSX2P58304 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.47□□□□□ -1.69
VSX2P58304 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VSX2P58304 AC233968.1-201ENST00000611212 1300 ntBASIC4.46□□□□□ -1.69
VSX2P58304 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
VSX2P58304 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.46□□□□□ -1.69
VSX2P58304 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.46□□□□□ -1.69
VSX2P58304 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.46□□□□□ -1.69
VSX2P58304 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
VSX2P58304 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.46□□□□□ -1.7
VSX2P58304 AL359922.3-201ENST00000624779 1670 ntBASIC4.46□□□□□ -1.7
VSX2P58304 AC108467.2-201ENST00000617640 1597 ntBASIC4.46□□□□□ -1.7
VSX2P58304 RN7SKP224-201ENST00000364140 325 ntBASIC4.46□□□□□ -1.7
VSX2P58304 Z98745.1-201ENST00000402553 494 ntBASIC4.46□□□□□ -1.7
VSX2P58304 AL049697.2-201ENST00000403708 294 ntBASIC4.46□□□□□ -1.7
VSX2P58304 AP000580.1-201ENST00000404439 358 ntBASIC4.46□□□□□ -1.7
VSX2P58304 RPS4XP9-201ENST00000405151 780 ntBASIC4.46□□□□□ -1.7
VSX2P58304 AL807761.1-201ENST00000417622 171 ntBASIC4.46□□□□□ -1.7
VSX2P58304 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.46□□□□□ -1.7
VSX2P58304 EIF4A1P1-201ENST00000420241 934 ntBASIC4.46□□□□□ -1.7
VSX2P58304 AL358176.3-201ENST00000420757 454 ntBASIC4.46□□□□□ -1.7
VSX2P58304 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.46□□□□□ -1.7
VSX2P58304 AL034379.1-201ENST00000423216 253 ntBASIC4.46□□□□□ -1.7
VSX2P58304 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.46□□□□□ -1.7
VSX2P58304 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.46□□□□□ -1.7
VSX2P58304 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
VSX2P58304 AC006463.2-201ENST00000473326 348 ntBASIC4.46□□□□□ -1.7
VSX2P58304 NIP7P2-201ENST00000485801 544 ntBASIC4.46□□□□□ -1.7
VSX2P58304 AC025164.1-201ENST00000496249 478 ntBASIC4.46□□□□□ -1.7
VSX2P58304 ARL4AP1-201ENST00000503220 705 ntBASIC4.46□□□□□ -1.7
VSX2P58304 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.46□□□□□ -1.7
VSX2P58304 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.46□□□□□ -1.7
VSX2P58304 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.46□□□□□ -1.7
VSX2P58304 HMGB1P19-201ENST00000517578 577 ntBASIC4.46□□□□□ -1.7
VSX2P58304 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.46□□□□□ -1.7
VSX2P58304 AC115989.2-201ENST00000578640 563 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms