Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RPL7P50-201ENST00000600588 727 ntBASIC4.54□□□□□ -1.68
PKNOX1P55347 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.54□□□□□ -1.68
PKNOX1P55347 AC233280.2-201ENST00000603917 1070 ntBASIC4.54□□□□□ -1.68
PKNOX1P55347 AL391358.1-201ENST00000605342 190 ntBASIC4.54□□□□□ -1.68
PKNOX1P55347 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.54□□□□□ -1.68
PKNOX1P55347 AC015922.4-201ENST00000612568 690 ntBASIC4.54□□□□□ -1.68
PKNOX1P55347 AC055839.1-201ENST00000634467 498 ntBASIC4.54□□□□□ -1.68
PKNOX1P55347 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PKNOX1P55347 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PKNOX1P55347 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PKNOX1P55347 AC005332.5-201ENST00000591222 2919 ntBASIC4.54□□□□□ -1.68
PKNOX1P55347 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
PKNOX1P55347 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.54□□□□□ -1.68
PKNOX1P55347 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PKNOX1P55347 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.54□□□□□ -1.68
PKNOX1P55347 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.54□□□□□ -1.68
PKNOX1P55347 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PKNOX1P55347 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PKNOX1P55347 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
PKNOX1P55347 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.53□□□□□ -1.68
PKNOX1P55347 SAMMSON-226ENST00000642089 1582 ntBASIC4.53□□□□□ -1.68
PKNOX1P55347 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PKNOX1P55347 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PKNOX1P55347 AL592182.3-201ENST00000642132 3304 ntBASIC4.53□□□□□ -1.68
PKNOX1P55347 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PKNOX1P55347 VPS35P1-201ENST00000563400 1518 ntBASIC4.53□□□□□ -1.68
PKNOX1P55347 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.53□□□□□ -1.68
PKNOX1P55347 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.53□□□□□ -1.68
PKNOX1P55347 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PKNOX1P55347 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
PKNOX1P55347 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.53□□□□□ -1.68
PKNOX1P55347 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.53□□□□□ -1.68
PKNOX1P55347 RN7SKP213-201ENST00000410746 298 ntBASIC4.53□□□□□ -1.68
PKNOX1P55347 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.53□□□□□ -1.68
PKNOX1P55347 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.53□□□□□ -1.68
PKNOX1P55347 AC007559.1-201ENST00000428736 355 ntBASIC4.53□□□□□ -1.68
PKNOX1P55347 TPTE2P1-204ENST00000435256 593 ntBASIC4.53□□□□□ -1.68
PKNOX1P55347 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.53□□□□□ -1.68
PKNOX1P55347 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.53□□□□□ -1.68
PKNOX1P55347 AC073587.1-201ENST00000447093 876 ntBASIC4.53□□□□□ -1.68
PKNOX1P55347 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PKNOX1P55347 AC010733.1-201ENST00000451515 401 ntBASIC4.53□□□□□ -1.68
PKNOX1P55347 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.53□□□□□ -1.68
PKNOX1P55347 SCARNA22-201ENST00000503991 125 ntBASIC4.53□□□□□ -1.68
PKNOX1P55347 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PKNOX1P55347 AC113430.1-201ENST00000506872 718 ntBASIC4.53□□□□□ -1.68
PKNOX1P55347 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.53□□□□□ -1.68
PKNOX1P55347 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PKNOX1P55347 AC008033.2-201ENST00000542626 177 ntBASIC4.53□□□□□ -1.68
PKNOX1P55347 EIF1AXP2-201ENST00000555940 413 ntBASIC4.53□□□□□ -1.68
PKNOX1P55347 AC131238.1-201ENST00000617135 328 ntBASIC4.53□□□□□ -1.68
PKNOX1P55347 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
PKNOX1P55347 OR10AB1P-202ENST00000641219 1686 ntBASIC4.53□□□□□ -1.68
PKNOX1P55347 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PKNOX1P55347 INTS6P1-201ENST00000504674 2530 ntBASIC4.52□□□□□ -1.69
PKNOX1P55347 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
PKNOX1P55347 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PKNOX1P55347 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PKNOX1P55347 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PKNOX1P55347 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
PKNOX1P55347 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PKNOX1P55347 OR52B1P-201ENST00000316506 909 ntBASIC4.52□□□□□ -1.69
PKNOX1P55347 SNORA74A-201ENST00000364089 198 ntBASIC4.52□□□□□ -1.69
PKNOX1P55347 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PKNOX1P55347 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.52□□□□□ -1.69
PKNOX1P55347 AL139039.2-201ENST00000407436 479 ntBASIC4.52□□□□□ -1.69
PKNOX1P55347 RN7SKP267-201ENST00000410381 285 ntBASIC4.52□□□□□ -1.69
PKNOX1P55347 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.52□□□□□ -1.69
PKNOX1P55347 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PKNOX1P55347 PDSS1P1-201ENST00000422953 1114 ntBASIC4.52□□□□□ -1.69
PKNOX1P55347 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.52□□□□□ -1.69
PKNOX1P55347 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.52□□□□□ -1.69
PKNOX1P55347 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PKNOX1P55347 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.52□□□□□ -1.69
PKNOX1P55347 NPM1P39-201ENST00000449818 867 ntBASIC4.52□□□□□ -1.69
PKNOX1P55347 PPIAP20-201ENST00000449839 135 ntBASIC4.52□□□□□ -1.69
PKNOX1P55347 AC016724.1-201ENST00000453215 421 ntBASIC4.52□□□□□ -1.69
PKNOX1P55347 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.52□□□□□ -1.69
PKNOX1P55347 RPSAP50-201ENST00000481955 852 ntBASIC4.52□□□□□ -1.69
PKNOX1P55347 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.52□□□□□ -1.69
PKNOX1P55347 AC098799.3-201ENST00000506095 438 ntBASIC4.52□□□□□ -1.69
PKNOX1P55347 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.52□□□□□ -1.69
PKNOX1P55347 GLRXP2-201ENST00000555594 321 ntBASIC4.52□□□□□ -1.69
PKNOX1P55347 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.52□□□□□ -1.69
PKNOX1P55347 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.52□□□□□ -1.69
PKNOX1P55347 AC027455.1-201ENST00000574104 594 ntBASIC4.52□□□□□ -1.69
PKNOX1P55347 MTND2P13-201ENST00000577438 1039 ntBASIC4.52□□□□□ -1.69
PKNOX1P55347 NPM1P45-201ENST00000583151 559 ntBASIC4.52□□□□□ -1.69
PKNOX1P55347 AC091178.1-203ENST00000584586 279 ntBASIC4.52□□□□□ -1.69
PKNOX1P55347 AC008966.2-201ENST00000606157 453 ntBASIC4.52□□□□□ -1.69
PKNOX1P55347 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.52□□□□□ -1.69
PKNOX1P55347 SNX18P1Y-201ENST00000616231 511 ntBASIC4.52□□□□□ -1.69
PKNOX1P55347 LINC00901.1-201ENST00000617252 152 ntBASIC4.52□□□□□ -1.69
PKNOX1P55347 AC023509.5-201ENST00000617434 807 ntBASIC4.52□□□□□ -1.69
PKNOX1P55347 MIR6826-201ENST00000617808 98 ntBASIC4.52□□□□□ -1.69
PKNOX1P55347 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.52□□□□□ -1.69
PKNOX1P55347 VN2R3P-201ENST00000422626 1412 ntBASIC4.52□□□□□ -1.69
PKNOX1P55347 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PKNOX1P55347 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PKNOX1P55347 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms