Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH12P55289 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CDH12P55289 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH12P55289 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH12P55289 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CDH12P55289 RBM22P1-201ENST00000578589 1214 ntBASIC4.86□□□□□ -1.63
CDH12P55289 RN7SL708P-201ENST00000580952 299 ntBASIC4.86□□□□□ -1.63
CDH12P55289 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH12P55289 FO393422.1-201ENST00000603908 708 ntBASIC4.86□□□□□ -1.63
CDH12P55289 AC009597.2-201ENST00000604659 592 ntBASIC4.86□□□□□ -1.63
CDH12P55289 AL162431.4-201ENST00000604674 411 ntBASIC4.86□□□□□ -1.63
CDH12P55289 AC000068.2-201ENST00000608816 460 ntBASIC4.86□□□□□ -1.63
CDH12P55289 AC096586.1-201ENST00000610267 561 ntBASIC4.86□□□□□ -1.63
CDH12P55289 FRG1HP-204ENST00000617940 757 ntBASIC4.86□□□□□ -1.63
CDH12P55289 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH12P55289 AC119674.1-212ENST00000641155 993 ntBASIC4.86□□□□□ -1.63
CDH12P55289 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH12P55289 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.86□□□□□ -1.63
CDH12P55289 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.86□□□□□ -1.63
CDH12P55289 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH12P55289 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CDH12P55289 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH12P55289 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CDH12P55289 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH12P55289 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH12P55289 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
CDH12P55289 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CDH12P55289 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH12P55289 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH12P55289 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH12P55289 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH12P55289 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH12P55289 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH12P55289 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH12P55289 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.85□□□□□ -1.63
CDH12P55289 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH12P55289 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CDH12P55289 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.85□□□□□ -1.63
CDH12P55289 AC005294.1-201ENST00000355509 281 ntBASIC4.85□□□□□ -1.63
CDH12P55289 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CDH12P55289 RNA5SP319-201ENST00000362768 119 ntBASIC4.85□□□□□ -1.63
CDH12P55289 RNU6-532P-201ENST00000384318 107 ntBASIC4.85□□□□□ -1.63
CDH12P55289 RNU6-1242P-201ENST00000391052 103 ntBASIC4.85□□□□□ -1.63
CDH12P55289 AL021331.1-201ENST00000402817 582 ntBASIC4.85□□□□□ -1.63
CDH12P55289 HMGB3P18-201ENST00000406327 590 ntBASIC4.85□□□□□ -1.63
CDH12P55289 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH12P55289 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH12P55289 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH12P55289 RPL22P18-201ENST00000417197 377 ntBASIC4.85□□□□□ -1.63
CDH12P55289 MTND4P3-201ENST00000417829 541 ntBASIC4.85□□□□□ -1.63
CDH12P55289 AL121878.1-201ENST00000418638 859 ntBASIC4.85□□□□□ -1.63
CDH12P55289 DPY19L1P2-201ENST00000426647 915 ntBASIC4.85□□□□□ -1.63
CDH12P55289 FTLP19-201ENST00000433300 394 ntBASIC4.85□□□□□ -1.63
CDH12P55289 MTCO1P52-201ENST00000433928 531 ntBASIC4.85□□□□□ -1.63
CDH12P55289 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH12P55289 CLUHP1-201ENST00000435012 1190 ntBASIC4.85□□□□□ -1.63
CDH12P55289 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH12P55289 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH12P55289 MTCYBP31-201ENST00000438855 1122 ntBASIC4.85□□□□□ -1.63
CDH12P55289 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH12P55289 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH12P55289 RPL34P26-201ENST00000445636 354 ntBASIC4.85□□□□□ -1.63
CDH12P55289 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH12P55289 AC073909.1-201ENST00000447112 999 ntBASIC4.85□□□□□ -1.63
CDH12P55289 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH12P55289 AC004022.1-201ENST00000447766 1066 ntBASIC4.85□□□□□ -1.63
CDH12P55289 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH12P55289 BX842559.2-201ENST00000451418 605 ntBASIC4.85□□□□□ -1.63
CDH12P55289 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH12P55289 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH12P55289 RANP1-206ENST00000455094 651 ntBASIC4.85□□□□□ -1.63
CDH12P55289 PTGES3P5-201ENST00000455109 434 ntBASIC4.85□□□□□ -1.63
CDH12P55289 RPL7P45-201ENST00000455851 743 ntBASIC4.85□□□□□ -1.63
CDH12P55289 RN7SL51P-201ENST00000468230 285 ntBASIC4.85□□□□□ -1.63
CDH12P55289 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH12P55289 AC069304.1-201ENST00000491593 704 ntBASIC4.85□□□□□ -1.63
CDH12P55289 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH12P55289 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH12P55289 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH12P55289 AC104417.1-201ENST00000523974 751 ntBASIC4.85□□□□□ -1.63
CDH12P55289 MTATP6P15-201ENST00000527233 835 ntBASIC4.85□□□□□ -1.63
CDH12P55289 LRRC6P1-201ENST00000532188 885 ntBASIC4.85□□□□□ -1.63
CDH12P55289 OR7E128P-201ENST00000532736 1024 ntBASIC4.85□□□□□ -1.63
CDH12P55289 AC006518.2-201ENST00000542513 940 ntBASIC4.85□□□□□ -1.63
CDH12P55289 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH12P55289 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.85□□□□□ -1.63
CDH12P55289 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH12P55289 BLZF2P-201ENST00000553776 1130 ntBASIC4.85□□□□□ -1.63
CDH12P55289 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.85□□□□□ -1.63
CDH12P55289 MIR4472-2-201ENST00000582069 67 ntBASIC4.85□□□□□ -1.63
CDH12P55289 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH12P55289 CCDC58P3-201ENST00000590792 430 ntBASIC4.85□□□□□ -1.63
CDH12P55289 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH12P55289 AC008751.2-201ENST00000597885 980 ntBASIC4.85□□□□□ -1.63
CDH12P55289 NIFKP6-201ENST00000598115 845 ntBASIC4.85□□□□□ -1.63
CDH12P55289 AC005252.1-201ENST00000604518 1063 ntBASIC4.85□□□□□ -1.63
CDH12P55289 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH12P55289 RN7SL787P-201ENST00000613000 284 ntBASIC4.85□□□□□ -1.63
CDH12P55289 AC123767.1-202ENST00000620407 817 ntBASIC4.85□□□□□ -1.63
CDH12P55289 AP000648.2-201ENST00000624182 404 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms